Add catchall OSError to recoverable exceptions #350
Workflow file for this run
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name: Framework tests | |
on: [push, pull_request] | |
env: | |
GALAXY_TEST_DBURI: 'postgresql://postgres:postgres@localhost:5432/galaxy?client_encoding=utf8' | |
jobs: | |
test: | |
name: Test | |
runs-on: ubuntu-latest | |
strategy: | |
matrix: | |
python-version: ['3.7'] | |
galaxy-branch: ['dev', 'master'] | |
metadata-strategy: ['directory'] | |
include: | |
- python-version: '3.7' | |
galaxy-branch: 'dev' | |
metadata-strategy: 'extended' | |
services: | |
postgres: | |
image: postgres:13 | |
env: | |
POSTGRES_USER: postgres | |
POSTGRES_PASSWORD: postgres | |
POSTGRES_DB: postgres | |
ports: | |
- 5432:5432 | |
steps: | |
- uses: actions/checkout@v2 | |
with: | |
path: 'pulsar' | |
- name: Checkout tools repo | |
uses: actions/checkout@v2 | |
with: | |
repository: galaxyproject/galaxy | |
ref: ${{ matrix.galaxy-branch }} | |
path: galaxy | |
- uses: actions/setup-python@v2 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Build Pulsar wheel and replace Galaxy's requirements. | |
run: python tools/replace_galaxy_requirements_for_ci.py | |
working-directory: 'pulsar' | |
- name: Cache pip dir | |
uses: actions/cache@v2 | |
with: | |
path: ~/.cache/pip | |
key: pip-cache-${{ matrix.python-version }}-${{ hashFiles('galaxy/requirements.txt') }} | |
- name: Run tests | |
run: ./run_tests.sh --framework | |
working-directory: 'galaxy' | |
env: | |
GALAXY_TEST_JOB_CONFIG_FILE: ../pulsar/test_data/test_job_conf.yaml | |
GALAXY_CONFIG_OVERRIDE_METADATA_STRATEGY: ${{ matrix.metadata-strategy }} | |
continue-on-error: ${{ matrix.galaxy-branch == 'master' }} | |
- uses: actions/upload-artifact@v2 | |
with: | |
name: Framework test results (${{ matrix.python-version }}) | |
path: 'galaxy/run_framework_tests.html' |