Split existing tool filtering command into 2 commands generating comm…

…unity reviewable TSV (#212) * Split filter command into 2 commands generating community reviewable TSV * Update community resources * Add test conditional for format script
galaxyproject · Nov 6, 2024 · 2313461 · 2313461
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diff --git a/.github/workflows/run_tests.yaml b/.github/workflows/run_tests.yaml
@@ -64,7 +64,7 @@ jobs:
           bash sources/bin/get_community_tools.sh test
       - name: Create interactive table and wordcloud
         run: | 
-          bash sources/bin/format_tools.sh
+          bash sources/bin/format_tools.sh test
 
   test-tutorials:
     runs-on: ubuntu-20.04

diff --git a/communities/all/resources/tools.tsv b/communities/all/resources/tools.tsv
diff --git a/communities/assembly/resources/tools.tsv b/communities/assembly/resources/tools.tsv
diff --git a/communities/assembly/resources/tools_filtered_by_ts_categories.json b/communities/assembly/resources/tools_filtered_by_ts_categories.json
diff --git a/communities/assembly/resources/tools_filtered_by_ts_categories.tsv b/communities/assembly/resources/tools_filtered_by_ts_categories.tsv
diff --git a/communities/biodiversity/metadata/tool_status.tsv b/communities/biodiversity/metadata/tool_status.tsv
diff --git a/communities/biodiversity/resources/tools.tsv b/communities/biodiversity/resources/tools.tsv
diff --git a/communities/biodiversity/resources/tools_filtered_by_ts_categories.json b/communities/biodiversity/resources/tools_filtered_by_ts_categories.json
diff --git a/communities/biodiversity/resources/tools_filtered_by_ts_categories.tsv b/communities/biodiversity/resources/tools_filtered_by_ts_categories.tsv
diff --git a/communities/genome/resources/tools.tsv b/communities/genome/resources/tools.tsv
diff --git a/communities/genome/resources/tools_filtered_by_ts_categories.json b/communities/genome/resources/tools_filtered_by_ts_categories.json
diff --git a/communities/genome/resources/tools_filtered_by_ts_categories.tsv b/communities/genome/resources/tools_filtered_by_ts_categories.tsv
diff --git a/communities/imaging/metadata/tool_status.tsv b/communities/imaging/metadata/tool_status.tsv
diff --git a/communities/imaging/resources/tools.tsv b/communities/imaging/resources/tools.tsv
diff --git a/communities/imaging/resources/tools_filtered_by_ts_categories.json b/communities/imaging/resources/tools_filtered_by_ts_categories.json
diff --git a/communities/imaging/resources/tools_filtered_by_ts_categories.tsv b/communities/imaging/resources/tools_filtered_by_ts_categories.tsv
diff --git a/communities/machine-learning/metadata/tool_status.tsv b/communities/machine-learning/metadata/tool_status.tsv
@@ -1 +1,2 @@
+	To keep	Deprecated
 jupyter_job	FALSE	FALSE
diff --git a/communities/machine-learning/resources/tools.tsv b/communities/machine-learning/resources/tools.tsv