Weekly resource fetching and community filtering #29
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| name: Weekly resource fetching and community filtering | |
| on: | |
| workflow_dispatch: | |
| schedule: | |
| #Every Sunday at 8:00 am | |
| - cron: "0 8 * * 0" | |
| # Allow only one concurrent deployment, skipping runs queued between the run in-progress and latest queued. | |
| # However, do NOT cancel in-progress runs as we want to allow these production deployments to complete. | |
| concurrency: | |
| group: "tools" | |
| cancel-in-progress: false | |
| jobs: | |
| fetch-servers: | |
| runs-on: ubuntu-20.04 | |
| name: Fetch servers | |
| steps: | |
| - name: Checkout main | |
| uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.11' | |
| - name: Install requirement | |
| run: | | |
| python -m pip install -r requirements.txt | |
| sudo apt-get install jq | |
| - name: Fetch list of all available servers | |
| run: | | |
| python sources/bin/get_public_galaxy_servers.py -o sources/data/available_public_servers.csv | |
| - name: Archive available servers | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: available-servers | |
| path: sources/data/available_public_servers.csv | |
| fetch-tools-stepwise: | |
| runs-on: ubuntu-20.04 | |
| name: Fetch tool stepwise | |
| environment: fetch-tools | |
| needs: fetch-servers | |
| strategy: | |
| #max-parallel: 1 #need to run one after another, since otherwise there is a chance, that mulitple jobs want to push to the results branch at the same time (which fails due to merge) | |
| matrix: | |
| subset: | |
| - repositories01.list | |
| - repositories02.list | |
| - repositories03.list | |
| - repositories04.list | |
| steps: | |
| - name: Checkout main | |
| uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.11' | |
| - name: Install requirement | |
| run: python -m pip install -r requirements.txt | |
| - name: Download available servers | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: available-servers | |
| path: sources/data/ | |
| - name: Fetch all tool stepwise | |
| run: | | |
| bash sources/bin/extract_all_tools.sh "${{ matrix.subset }}" | |
| env: | |
| GITHUB_API_KEY: ${{ secrets.GH_API_TOKEN }} | |
| - name: Archive tool sublists production artifacts | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: tools-${{ matrix.subset }} | |
| path: communities/all/resources/${{ matrix.subset }}_tools.* | |
| merge-fetch-filter: | |
| runs-on: ubuntu-20.04 | |
| needs: fetch-tools-stepwise | |
| name: Merge tools, fetch tutorials and filter the resources for communities | |
| steps: | |
| - name: Checkout main | |
| uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.11' | |
| - name: Install requirement | |
| run: | | |
| python -m pip install -r requirements.txt | |
| sudo apt-get install jq | |
| - name: Download stepwise tool lists | |
| uses: actions/download-artifact@v4 | |
| with: | |
| pattern: tools-* | |
| merge-multiple: true | |
| path: communities/all/resources/ | |
| - name: Display structure of downloaded files | |
| run: ls -R communities/all/resources/ | |
| - name: Merge all tools | |
| run: | #merge files with only one header -> https://stackoverflow.com/questions/16890582/unixmerge-multiple-csv-files-with-same-header-by-keeping-the-header-of-the-firs; map(.[]) -> https://stackoverflow.com/questions/42011086/merge-arrays-of-json (get flat array, one tool per entry) | |
| awk 'FNR==1 && NR!=1{next;}{print}' communities/all/resources/repositories*.list_tools.tsv > communities/all/resources/tools.tsv | |
| jq -s 'map(.[])' communities/all/resources/repositories*.list_tools.json > communities/all/resources/tools.json | |
| rm communities/all/resources/repositories*.list_tools.json | |
| rm communities/all/resources/repositories*.list_tools.tsv | |
| - name: Generate wordcloud and interactive table | |
| run: | | |
| bash sources/bin/format_tools.sh | |
| - name: Fetch all workflows | |
| run: | | |
| bash sources/bin/extract_all_workflows.sh | |
| - name: Filter workflows for communities | |
| run: | | |
| bash sources/bin/get_community_workflows.sh | |
| - name: Fetch all tutorials | |
| run: | | |
| bash sources/bin/extract_all_tutorials.sh | |
| env: | |
| PLAUSIBLE_API_KEY: ${{ secrets.PLAUSIBLE_API_TOKEN }} | |
| - name: Filter tutorials for communities | |
| run: | | |
| bash sources/bin/get_community_tutorials.sh | |
| #- name: Update tool to keep and exclude for communities | |
| # run: | | |
| # bash sources/bin/update_tools_to_keep_exclude.sh | |
| - name: Filter tools for communities | |
| run: | | |
| bash sources/bin/get_community_tools.sh | |
| - name: Create Pull Request | |
| uses: peter-evans/create-pull-request@v4 | |
| with: | |
| commit-message: Update resources | |
| title: Automatic resources update | |
| body: Automatic resource update done via GitHub Action once a week | |
| base: main | |
| branch: resource-update | |
| delete-branch: true |