Fix microgalaxy wf tags #112
Workflow file for this run
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name: Run tests | |
on: [push, pull_request_target] | |
jobs: | |
test-tools: | |
runs-on: ubuntu-20.04 | |
environment: fetch-tools | |
steps: | |
- name: Checkout results | |
uses: actions/checkout@v4 | |
with: | |
ref: results | |
path: results | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: '3.11' | |
- name: Install requirement | |
run: python -m pip install -r requirements.txt | |
- name: Tool extraction | |
run: | | |
bash bin/extract_all_tools.sh test | |
env: | |
GITHUB_API_KEY: ${{ secrets.GH_API_TOKEN }} | |
- name: Tool filter | |
run: | | |
bash bin/get_community_tools.sh test | |
- name: Create interactive table and wordcloud | |
run: | | |
bash bin/format_tools.sh | |
test-tutorials: | |
runs-on: ubuntu-20.04 | |
steps: | |
- name: Checkout results | |
uses: actions/checkout@v4 | |
with: | |
ref: results | |
path: results | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: '3.11' | |
- name: Install requirement | |
run: python -m pip install -r requirements.txt | |
- name: Tutorial extraction | |
run: | | |
bash bin/extract_all_tutorials.sh test | |
env: | |
PLAUSIBLE_API_KEY: ${{ secrets.PLAUSIBLE_API_TOKEN }} | |
- name: Tutorial filtering | |
run: | | |
bash bin/get_community_tutorials.sh test | |
test-workflows: | |
runs-on: ubuntu-20.04 | |
steps: | |
- name: Checkout results | |
uses: actions/checkout@v4 | |
with: | |
ref: results | |
path: results | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: '3.11' | |
- name: Install requirement | |
run: python -m pip install -r requirements.txt | |
- name: Tutorial extraction | |
run: | | |
bash bin/extract_all_workflows.sh test | |
env: | |
PLAUSIBLE_API_KEY: ${{ secrets.PLAUSIBLE_API_TOKEN }} | |
- name: Tutorial filtering | |
run: | | |
bash bin/get_community_workflows.sh test |