Add integration test

test/integration/test_metadata_containerized.py

@@ -0,0 +1,71 @@
+import os
+import subprocess
+
+from galaxy_test.base.populators import DatasetPopulator
+from galaxy_test.driver import integration_util
+from galaxy_test.driver.driver_util import galaxy_root
+from .test_containerized_jobs import (
+    disable_dependency_resolution,
+    skip_if_container_type_unavailable,
+)
+
+DOCKERIZED_JOB_CONFIG = {
+    "runners": {"local": {"load": "galaxy.jobs.runners.local:LocalJobRunner", "workers": 1}},
+    "execution": {
+        "default": "local_docker",
+        "environments": {
+            "local_docker": {
+                "runner": "local",
+                "docker_enabled": True,
+                "metadata_config": {
+                    "containerize": True,
+                    "engine": "docker",
+                    "image": "galaxyproject/galaxy-job-execution",
+                },
+            },
+        },
+    },
+}
+
+
+class ContainerizedMetadataIntegrationTestCase(integration_util.IntegrationTestCase):
+    dataset_populator: DatasetPopulator
+    framework_tool_and_types = True
+    container_type = "docker"
+
+    @classmethod
+    def handle_galaxy_config_kwds(cls, config) -> None:
+        super().handle_galaxy_config_kwds(config)
+        config["job_config"] = DOCKERIZED_JOB_CONFIG
+        config["enable_celery_tasks"] = False
+        config["metadata_strategy"] = "extended"
+        disable_dependency_resolution(config)
+
+    def setUp(self) -> None:
+        super().setUp()
+        self.dataset_populator = DatasetPopulator(self.galaxy_interactor)
+
+    @classmethod
+    def setUpClass(cls) -> None:
+        skip_if_container_type_unavailable(cls)
+        subprocess.check_output(
+            [
+                "docker",
+                "build",
+                "-t",
+                "galaxyproject/galaxy-job-execution",
+                "-f",
+                os.path.join(galaxy_root, "packages", "job_execution", "Dockerfile"),
+                galaxy_root,
+            ]
+        )
+        super().setUpClass()
+
+
+instance = integration_util.integration_module_instance(ContainerizedMetadataIntegrationTestCase)
+
+test_tools = integration_util.integration_tool_runner(
+    [
+        "metadata_bam",
+    ]
+)