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Merge pull request #17230 from galaxybot/dev_auto_update_dependencies
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Update Python dependencies
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mvdbeek authored Dec 23, 2023
2 parents fc8e287 + d1623da commit 436754a
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18 changes: 9 additions & 9 deletions lib/galaxy/dependencies/dev-requirements.txt
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@ aiohttp==3.9.1 ; python_version >= "3.8" and python_version < "3.12"
aiosignal==1.3.1 ; python_version >= "3.8" and python_version < "3.12"
alabaster==0.7.13 ; python_version >= "3.8" and python_version < "3.12"
amqp==5.2.0 ; python_version >= "3.8" and python_version < "3.12"
anyio==4.1.0 ; python_version >= "3.8" and python_version < "3.12"
anyio==4.2.0 ; python_version >= "3.8" and python_version < "3.12"
ase==3.22.1 ; python_version >= "3.8" and python_version < "3.12"
async-timeout==4.0.3 ; python_version >= "3.8" and python_version < "3.11"
attrs==23.1.0 ; python_version >= "3.8" and python_version < "3.12"
Expand All @@ -11,7 +11,7 @@ babel==2.14.0 ; python_version >= "3.8" and python_version < "3.12"
backports-zoneinfo==0.2.1 ; python_version >= "3.8" and python_version < "3.9"
backports-zoneinfo[tzdata]==0.2.1 ; python_version >= "3.8" and python_version < "3.9"
billiard==4.2.0 ; python_version >= "3.8" and python_version < "3.12"
black==23.12.0 ; python_version >= "3.8" and python_version < "3.12"
black==23.12.1 ; python_version >= "3.8" and python_version < "3.12"
build==1.0.3 ; python_version >= "3.8" and python_version < "3.12"
cachecontrol[filecache]==0.13.1 ; python_version >= "3.8" and python_version < "3.12"
celery==5.3.6 ; python_version >= "3.8" and python_version < "3.12"
Expand All @@ -25,7 +25,7 @@ click==8.1.7 ; python_version >= "3.8" and python_version < "3.12"
codespell==2.2.6 ; python_version >= "3.8" and python_version < "3.12"
colorama==0.4.6 ; python_version >= "3.8" and python_version < "3.12" and (sys_platform == "win32" or platform_system == "Windows" or os_name == "nt")
contourpy==1.1.1 ; python_version >= "3.8" and python_version < "3.12"
coverage[toml]==7.3.3 ; python_version >= "3.8" and python_version < "3.12"
coverage[toml]==7.3.4 ; python_version >= "3.8" and python_version < "3.12"
cryptography==41.0.7 ; python_version >= "3.8" and python_version < "3.12"
cwltest==2.4.20231031143732 ; python_version >= "3.8" and python_version < "3.12"
cycler==0.12.1 ; python_version >= "3.8" and python_version < "3.12"
Expand All @@ -36,16 +36,16 @@ docutils==0.18.1 ; python_version >= "3.8" and python_version < "3.12"
exceptiongroup==1.2.0 ; python_version >= "3.8" and python_version < "3.11"
filelock==3.13.1 ; python_version >= "3.8" and python_version < "3.12"
fluent-logger==0.10.0 ; python_version >= "3.8" and python_version < "3.12"
fonttools==4.46.0 ; python_version >= "3.8" and python_version < "3.12"
fonttools==4.47.0 ; python_version >= "3.8" and python_version < "3.12"
frozenlist==1.4.1 ; python_version >= "3.8" and python_version < "3.12"
galaxy-release-util==0.1.5 ; python_version >= "3.8" and python_version < "3.12"
greenlet==3.0.1 ; python_version >= "3.8" and python_version < "3.12"
h11==0.14.0 ; python_version >= "3.8" and python_version < "3.12"
httpcore==1.0.2 ; python_version >= "3.8" and python_version < "3.12"
httpx==0.25.2 ; python_version >= "3.8" and python_version < "3.12"
httpx==0.26.0 ; python_version >= "3.8" and python_version < "3.12"
idna==3.6 ; python_version >= "3.8" and python_version < "3.12"
imagesize==1.4.1 ; python_version >= "3.8" and python_version < "3.12"
importlib-metadata==7.0.0 ; python_version >= "3.8" and python_version < "3.12"
importlib-metadata==7.0.1 ; python_version >= "3.8" and python_version < "3.12"
importlib-resources==6.1.1 ; python_version >= "3.8" and python_version < "3.10"
iniconfig==2.0.0 ; python_version >= "3.8" and python_version < "3.12"
isodate==0.6.1 ; python_version >= "3.8" and python_version < "3.12"
Expand All @@ -57,7 +57,7 @@ junit-xml==1.9 ; python_version >= "3.8" and python_version < "3.12"
keyring==24.3.0 ; python_version >= "3.8" and python_version < "3.12"
kiwisolver==1.4.5 ; python_version >= "3.8" and python_version < "3.12"
kombu==5.3.4 ; python_version >= "3.8" and python_version < "3.12"
lxml==4.9.3 ; python_version >= "3.8" and python_version < "3.12"
lxml==4.9.4 ; python_version >= "3.8" and python_version < "3.12"
markdown-it-py==3.0.0 ; python_version >= "3.8" and python_version < "3.12"
markdown-it-reporter==0.0.2 ; python_version >= "3.8" and python_version < "3.12"
markupsafe==2.1.3 ; python_version >= "3.8" and python_version < "3.12"
Expand Down Expand Up @@ -87,8 +87,8 @@ pluggy==1.3.0 ; python_version >= "3.8" and python_version < "3.12"
port-for==0.7.2 ; python_version >= "3.8" and python_version < "3.12"
prettytable==3.9.0 ; python_version >= "3.8" and python_version < "3.12"
prompt-toolkit==3.0.43 ; python_version >= "3.8" and python_version < "3.12"
psutil==5.9.6 ; python_version >= "3.8" and python_version < "3.12" and sys_platform != "cygwin"
psycopg==3.1.15 ; python_version >= "3.8" and python_version < "3.12"
psutil==5.9.7 ; python_version >= "3.8" and python_version < "3.12" and sys_platform != "cygwin"
psycopg==3.1.16 ; python_version >= "3.8" and python_version < "3.12"
pycparser==2.21 ; python_version >= "3.8" and python_version < "3.12"
pyee==11.0.1 ; python_version >= "3.8" and python_version < "3.12"
pygithub==2.1.1 ; python_version >= "3.8" and python_version < "3.12"
Expand Down
2 changes: 1 addition & 1 deletion lib/galaxy/dependencies/pinned-lint-requirements.txt
Original file line number Diff line number Diff line change
Expand Up @@ -4,4 +4,4 @@ flake8-bugbear==23.12.2
mccabe==0.7.0
pycodestyle==2.11.1
pyflakes==3.1.0
ruff==0.1.8
ruff==0.1.9
18 changes: 9 additions & 9 deletions lib/galaxy/dependencies/pinned-requirements.txt
Original file line number Diff line number Diff line change
Expand Up @@ -6,11 +6,11 @@ aiofiles==23.2.1 ; python_version >= "3.8" and python_version < "3.12"
aiohttp==3.9.1 ; python_version >= "3.8" and python_version < "3.12"
aioitertools==0.11.0 ; python_version >= "3.8" and python_version < "3.12"
aiosignal==1.3.1 ; python_version >= "3.8" and python_version < "3.12"
alembic==1.13.0 ; python_version >= "3.8" and python_version < "3.12"
alembic==1.13.1 ; python_version >= "3.8" and python_version < "3.12"
amqp==5.2.0 ; python_version >= "3.8" and python_version < "3.12"
aniso8601==9.0.1 ; python_version >= "3.8" and python_version < "3.12"
anyio==4.1.0 ; python_version >= "3.8" and python_version < "3.12"
apispec==6.3.0 ; python_version >= "3.8" and python_version < "3.12"
anyio==4.2.0 ; python_version >= "3.8" and python_version < "3.12"
apispec==6.3.1 ; python_version >= "3.8" and python_version < "3.12"
appdirs==1.4.4 ; python_version >= "3.8" and python_version < "3.12"
arcp==0.2.1 ; python_version >= "3.8" and python_version < "3.12"
argcomplete==3.2.1 ; python_version >= "3.8" and python_version < "3.12"
Expand Down Expand Up @@ -85,7 +85,7 @@ h5grove==1.3.0 ; python_version >= "3.8" and python_version < "3.12"
h5py==3.10.0 ; python_version >= "3.8" and python_version < "3.12"
humanfriendly==10.0 ; python_version >= "3.8" and python_version < "3.12"
idna==3.6 ; python_version >= "3.8" and python_version < "3.12"
importlib-metadata==7.0.0 ; python_version >= "3.8" and python_version < "3.12"
importlib-metadata==7.0.1 ; python_version >= "3.8" and python_version < "3.12"
importlib-resources==6.1.1 ; python_version >= "3.8" and python_version < "3.9"
isa-rwval==0.10.10 ; python_version >= "3.8" and python_version < "3.12"
isodate==0.6.1 ; python_version >= "3.8" and python_version < "3.12"
Expand All @@ -96,7 +96,7 @@ jsonschema-specifications==2023.11.2 ; python_version >= "3.8" and python_versio
jsonschema==4.20.0 ; python_version >= "3.8" and python_version < "3.12"
kombu==5.3.4 ; python_version >= "3.8" and python_version < "3.12"
lagom==2.6.0 ; python_version >= "3.8" and python_version < "3.12"
lxml==4.9.3 ; python_version >= "3.8" and python_version < "3.12"
lxml==4.9.4 ; python_version >= "3.8" and python_version < "3.12"
mako==1.3.0 ; python_version >= "3.8" and python_version < "3.12"
markdown-it-py==3.0.0 ; python_version >= "3.8" and python_version < "3.12"
markdown==3.5.1 ; python_version >= "3.8" and python_version < "3.12"
Expand All @@ -117,7 +117,7 @@ oauthlib==3.2.2 ; python_version >= "3.8" and python_version < "3.12"
orjson==3.9.10 ; python_version >= "3.8" and python_version < "3.12"
oyaml==1.0 ; python_version >= "3.8" and python_version < "3.12"
packaging==23.2 ; python_version >= "3.8" and python_version < "3.12"
paramiko==3.3.1 ; python_version >= "3.8" and python_version < "3.12"
paramiko==3.4.0 ; python_version >= "3.8" and python_version < "3.12"
parsley==1.3 ; python_version >= "3.8" and python_version < "3.12"
paste==3.7.1 ; python_version >= "3.8" and python_version < "3.12"
pastedeploy==3.1.0 ; python_version >= "3.8" and python_version < "3.12"
Expand All @@ -126,7 +126,7 @@ pkgutil-resolve-name==1.3.10 ; python_version >= "3.8" and python_version < "3.9
promise==2.3 ; python_version >= "3.8" and python_version < "3.12"
prompt-toolkit==3.0.43 ; python_version >= "3.8" and python_version < "3.12"
prov==1.5.1 ; python_version >= "3.8" and python_version < "3.12"
psutil==5.9.6 ; python_version >= "3.8" and python_version < "3.12"
psutil==5.9.7 ; python_version >= "3.8" and python_version < "3.12"
pulsar-galaxy-lib==0.15.5 ; python_version >= "3.8" and python_version < "3.12"
pyasn1==0.5.1 ; python_version >= "3.8" and python_version < "3.12"
pycparser==2.21 ; python_version >= "3.8" and python_version < "3.12"
Expand Down Expand Up @@ -166,7 +166,7 @@ requests==2.31.0 ; python_version >= "3.8" and python_version < "3.12"
rich==13.7.0 ; python_version >= "3.8" and python_version < "3.12"
rocrate==0.9.0 ; python_version >= "3.8" and python_version < "3.12"
routes==2.5.1 ; python_version >= "3.8" and python_version < "3.12"
rpds-py==0.13.2 ; python_version >= "3.8" and python_version < "3.12"
rpds-py==0.15.2 ; python_version >= "3.8" and python_version < "3.12"
rsa==4.9 ; python_version >= "3.8" and python_version < "3.12"
ruamel-yaml-clib==0.2.8 ; platform_python_implementation == "CPython" and python_version < "3.12" and python_version >= "3.8"
ruamel-yaml==0.18.5 ; python_version >= "3.8" and python_version < "3.12"
Expand Down Expand Up @@ -201,7 +201,7 @@ tzdata==2023.3 ; python_version >= "3.8" and python_version < "3.12"
tzlocal==5.2 ; python_version >= "3.8" and python_version < "3.12"
ubiquerg==0.6.3 ; python_version >= "3.8" and python_version < "3.12"
urllib3==1.26.18 ; python_version >= "3.8" and python_version < "3.12"
uvicorn==0.24.0.post1 ; python_version >= "3.8" and python_version < "3.12"
uvicorn==0.25.0 ; python_version >= "3.8" and python_version < "3.12"
uvloop==0.19.0 ; python_version >= "3.8" and python_version < "3.12"
vine==5.1.0 ; python_version >= "3.8" and python_version < "3.12"
wcwidth==0.2.12 ; python_version >= "3.8" and python_version < "3.12"
Expand Down
2 changes: 1 addition & 1 deletion lib/galaxy/dependencies/pinned-typecheck-requirements.txt
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
cffi==1.16.0 ; python_version >= "3.8" and python_version < "3.12"
cryptography==41.0.7 ; python_version >= "3.8" and python_version < "3.12"
mypy-extensions==1.0.0 ; python_version >= "3.8" and python_version < "3.12"
mypy==1.7.1 ; python_version >= "3.8" and python_version < "3.12"
mypy==1.8.0 ; python_version >= "3.8" and python_version < "3.12"
pycparser==2.21 ; python_version >= "3.8" and python_version < "3.12"
pydantic==1.10.13 ; python_version >= "3.8" and python_version < "3.12"
tomli==2.0.1 ; python_version >= "3.8" and python_version < "3.11"
Expand Down

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