Add Python 3.13 support #26129
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Database indexes | |
| on: | |
| push: | |
| paths-ignore: | |
| - 'client/**' | |
| - 'doc/**' | |
| - 'lib/galaxy_test/selenium/**' | |
| pull_request: | |
| paths-ignore: | |
| - 'client/**' | |
| - 'doc/**' | |
| - 'lib/galaxy_test/selenium/**' | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| defaults: | |
| run: | |
| working-directory: 'galaxy root' | |
| jobs: | |
| check: | |
| name: Check database indexes | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| db: ['postgresql', 'sqlite'] | |
| postgresql-version: ['13'] | |
| python-version: ['3.8'] | |
| include: | |
| - db: postgresql | |
| postgresql-version: '9.6' | |
| python-version: '3.8' | |
| services: | |
| postgres: | |
| image: postgres:${{ matrix.postgresql-version }} | |
| env: | |
| POSTGRES_USER: postgres | |
| POSTGRES_PASSWORD: postgres | |
| POSTGRES_DB: postgres | |
| ports: | |
| - 5432:5432 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| path: 'galaxy root' | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: 'pip' | |
| cache-dependency-path: 'galaxy root/requirements.txt' | |
| - name: Get full Python version | |
| id: full-python-version | |
| shell: bash | |
| run: echo "version=$(python -c 'import sys; print("-".join(str(v) for v in sys.version_info))')" >> $GITHUB_OUTPUT | |
| - name: Cache tox env | |
| uses: actions/cache@v4 | |
| with: | |
| path: .tox | |
| key: tox-cache-${{ runner.os }}-${{ steps.full-python-version.outputs.version }}-${{ hashFiles('galaxy root/requirements.txt') }}-check-indexes | |
| - name: Install tox | |
| run: pip install tox | |
| - name: Set database connection on PostgreSQL | |
| if: matrix.db == 'postgresql' | |
| run: echo 'GALAXY_CONFIG_OVERRIDE_DATABASE_CONNECTION=postgresql://postgres:postgres@localhost:5432/galaxy?client_encoding=utf8' >> $GITHUB_ENV | |
| - name: Check indexes | |
| run: tox -e check_indexes |