Add support for Python 3.10

galaxyproject · Oct 5, 2021 · b13c12a · b13c12a
1 parent 44a1a68
commit b13c12a
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Showing 6 changed files with 17 additions and 4 deletions.
diff --git a/.github/workflows/deploy.yaml b/.github/workflows/deploy.yaml
@@ -7,7 +7,7 @@ jobs:
       - uses: actions/checkout@v2
       - uses: actions/setup-python@v2
         with:
-          python-version: '3.9'
+          python-version: '3.10'
       - name: Install dependencies
         run: |
           python3 -m pip install --upgrade pip setuptools

diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml
@@ -46,6 +46,9 @@ jobs:
           - release_18.01
           - release_17.09
         include:
+          - os: ubuntu-latest
+            tox_env: py310
+            galaxy_version: dev
           - os: ubuntu-latest
             tox_env: py39
             galaxy_version: dev
@@ -69,7 +72,7 @@ jobs:
           key: pip-cache-${{ matrix.tox_env }}-${{ matrix.galaxy_version }}
       - name: Calculate Python version for BioBlend from tox_env
         id: get_bioblend_python_version
-        run: echo "::set-output name=bioblend_python_version::$(echo "${{ matrix.tox_env }}" | sed -e 's/^py\([0-9]\)\([0-9]\+\)/\1.\2/')"
+        run: echo "::set-output name=bioblend_python_version::$(echo "${{ matrix.tox_env }}" | sed -e 's/^py\([3-9]\)\([0-9]\+\)/\1.\2/')"
       - name: Set up Python for BioBlend
         uses: actions/setup-python@v2
         with:
@@ -110,6 +113,7 @@ jobs:
           tar xvzf ${{ matrix.galaxy_version }}.tar.gz | tail
           cd galaxy-${{ matrix.galaxy_version }}
           export GALAXY_DIR=$PWD
+          export GALAXY_PYTHON=python${{ steps.get_galaxy_python_version.outputs.galaxy_python_version }}
           export GALAXY_VERSION=${{ matrix.galaxy_version }}
           # Export GALAXY_CONFIG_FILE environment variable to be used by run_galaxy.sh
           export GALAXY_CONFIG_FILE=config/galaxy.ini

diff --git a/ABOUT.rst b/ABOUT.rst
@@ -3,7 +3,7 @@ interacting with `Galaxy`_ and `CloudMan`_  APIs.
 
 BioBlend is supported and tested on:
 
-- Python 3.6, 3.7, 3.8 and 3.9
+- Python 3.6, 3.7, 3.8, 3.9 and 3.10
 - Galaxy release_17.09 and later.
 
 BioBlend's goal is to make it easier to script and automate the running of

diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -1,3 +1,11 @@
+### BioBlend v - unreleased
+
+* Added support for Python 3.10. Added support for Galaxy release 21.09.
+
+* Added ``get_extra_files()`` method to ``HistoryClient``.
+
+* Improvements to type annotations, tests and documentation
+
 ### BioBlend v0.16.0 - 2021-06-13
 
 * Added support for Galaxy release 21.05.

diff --git a/README.rst b/README.rst
@@ -16,7 +16,7 @@ APIs.
 
 BioBlend is supported and tested on:
 
-- Python 3.6, 3.7, 3.8 and 3.9
+- Python 3.6, 3.7, 3.8, 3.9 and 3.10
 - Galaxy release_17.09 and later.
 
 Full docs are available at https://bioblend.readthedocs.io/ with a quick library

diff --git a/setup.cfg b/setup.cfg
@@ -25,6 +25,7 @@ classifiers =
         Programming Language :: Python :: 3.7
         Programming Language :: Python :: 3.8
         Programming Language :: Python :: 3.9
+        Programming Language :: Python :: 3.10
         Topic :: Scientific/Engineering :: Bio-Informatics
 description = Galaxy and CloudMan API library
 license = MIT