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🔥 remove unrelated files before archiving
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gabrieldansereau committed Feb 9, 2022
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6 changes: 1 addition & 5 deletions README.md
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Expand Up @@ -20,8 +20,6 @@ Note however that the data is not hosted in this remote repository due to size l

The repository is organized as follows:

- `archive/` contains possibly useful elements kept in case of future need. Archived scripts are not maintained and probably do not work as-is.

- `assets/` contains the pre-coarsened *Copernicus* land cover data (downloaded and coarsened in `src/00c_data_landcover-copernicus.jl`).

- `data/` is used to store the data.
Expand All @@ -31,13 +29,11 @@ The repository is organized as follows:
- `raw/` contains the raw CSV datasets from eBird (not version-controlled).
- `rdata/` contains `.RData` files used as backups in the R scripts, which are not essential and are not version controlled.

- `docs/` contains documents such as reports and presentations about the project, either for my committee meeting or QCBS conferences.

- `fig/` contains the figures produced, organized by outcome (`bart` for figures based on predicted data and `raw` for figures based on observed data).

- `src/` contains all the scripts used in the project. Ordered scripts in this directory represent the main steps of the analyses. Subfolders contain scripts with a more specific use.
- `lib/` is the library of the custom functions used in the main scripts.
- `others/` contains useful scripts that are not part of the main analyses. I try to maintain these (if I know I won't maintain a script, I'll archive or delete it).
- `others/` contains useful scripts that are not part of the main analyses
- `shell/` contains Bash scripts used for some operations.

## Analysis workflow
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