Skip to content
This repository has been archived by the owner on Jan 25, 2023. It is now read-only.

Commit

Permalink
Merge pull request #264 from ga4gh-beacon/issue-261
Browse files Browse the repository at this point in the history
Fix typo (issue #261)
  • Loading branch information
sdelatorrep authored Jan 30, 2019
2 parents 868a11e + 2e0caae commit 0b8a485
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion beacon.md
Original file line number Diff line number Diff line change
Expand Up @@ -258,7 +258,7 @@ An example `GET` request and response to the info endpoint:
|*referenceBases**|Reference bases for this variant (starting from `start`). Accepted values: [ACGT]* When querying for variants without specific base alterations (e.g. imprecise structural variants with separate `variantType` as well as `startMin` & `endMin` ... parameters), the use of a single "N" value is required.<br/>See the REF field in [VCF 4.2 specification](https://samtools.github.io/hts-specs/VCFv4.2.pdf).|string|`'G'`|
|*assemblyId* *|Assembly identifier|string|`'GRCh38'`|
|start~|Precise start coordinate position, allele locus (0-based, inclusive).<p>* `start` only:<br />- for single positions, e.g. the start of a specified sequence alteration where the size is given through the specified `alternateBases`<br />- typical use are queries for SNV and small InDels<br />- the use of `start` without an `end` parameter requires the use of `referenceBases`<br />* `start` and `end`:<br /> - special use case for exactly determined structural changes |integer|`345233`|
|startMin~|Minimum start coordinate<br />* `startMin` + `startMax` + `endMin` + `endMax`:<br />- for querying imprecise positions (e.g. identifying all structural variants starting anywhere between `startMin` <-> `startMax`, and ending anywhere between `endMin` <-> `endMax`<br />- single or double sided precise matches can be achieved by setting `startMin` = `startMax` OR `endMin` = `endMax`<br/> <br/>For more information on range querys, see: [Beacon-Querys](https://github.com/ga4gh-beacon/specification/wiki/Beacon-Queries#range-queries-and-structural-variants)|integer|`23433`|
|startMin~|Minimum start coordinate<br />* `startMin` + `startMax` + `endMin` + `endMax`:<br />- for querying imprecise positions (e.g. identifying all structural variants starting anywhere between `startMin` <-> `startMax`, and ending anywhere between `endMin` <-> `endMax`<br />- single or double sided precise matches can be achieved by setting `startMin` = `startMax` OR `endMin` = `endMax`<br/> <br/>For more information on range queries, see: [Beacon-Queries](https://github.com/ga4gh-beacon/specification/wiki/Beacon-Queries#range-queries-and-structural-variants)|integer|`23433`|
|startMax|Maximum start coordinate. See `startMin`.|integer|`23450`|
|end|Precise end coordinate (0-based, exclusive). See `start`.|integer|`455635`|
|endMin|Minimum end coordinate. See `startMin`.|integer|`23500`|
Expand Down

0 comments on commit 0b8a485

Please sign in to comment.