Fixes to python test environment #363
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# This uses actios: | |
# checkout: https://github.com/actions/checkout | |
# cache: https://github.com/actions/cache | |
# codecov-action: https://github.com/codecov/codecov-action | |
name: CI | |
on: | |
push: | |
branches: | |
- "*" | |
pull_request: | |
branches: | |
- "*" | |
# Nothing scheduled, just PRs and pushes | |
# schedule: | |
# - cron: "0 0 * * *" # Daily at midnight | |
jobs: | |
build: | |
name: Build (${{ matrix.python-version }} | ${{ matrix.os }}) | |
runs-on: ${{ matrix.os }} | |
strategy: | |
fail-fast: false | |
matrix: | |
os: [ "ubuntu-latest" ] | |
python-version: [ "3.9", "3.10" ] | |
steps: | |
- uses: actions/checkout@v2 | |
- name: Cache conda | |
uses: actions/cache@v3 | |
with: | |
path: ~/conda_pkgs_dir | |
key: ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-${{ hashFiles('ci/environment-${{ matrix.python-version }}.yml') }} | |
- uses: conda-incubator/setup-miniconda@v2 | |
with: | |
activate-environment: test_env # Defined in ci/environment*.yml | |
miniforge-variant: Mambaforge | |
miniforge-version: latest | |
use-mamba: true | |
python-version: ${{ matrix.python-version }} | |
environment-file: ci/environment-${{ matrix.python-version }}.yml | |
use-only-tar-bz2: true # IMPORTANT: This needs to be set for caching to work properly! | |
- name: Set up conda environment | |
shell: bash -l {0} | |
run: | | |
python -m pip install --no-deps git+https://github.com/MITgcm/xmitgcm.git petitRADTRANS==2.4.9 prt-phasecurve | |
python -m pip install -e . | |
conda list | |
- name: Run Tests | |
shell: bash -l {0} | |
run: | | |
py.test --cov=./ --cov-report=xml | |
- name: Upload code coverage to Codecov | |
uses: codecov/codecov-action@v1 | |
with: | |
file: ./coverage.xml | |
flags: unittests | |
env_vars: OS,PYTHON | |
name: codecov-umbrella | |
fail_ci_if_error: false | |
xarray-master: | |
name: Build xarray-master | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v2 | |
- name: Cache conda | |
uses: actions/cache@v3 | |
with: | |
path: ~/conda_pkgs_dir | |
key: ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-${{ hashFiles('ci/environment-xarraymaster.yml') }} | |
- uses: conda-incubator/setup-miniconda@v2 | |
with: | |
activate-environment: test_env # Defined in ci/environment-*.yml | |
auto-update-conda: false | |
environment-file: ci/environment-xarraymaster.yml | |
use-only-tar-bz2: true # IMPORTANT: This needs to be set for caching to work properly! | |
- name: Set up conda environment | |
shell: bash -l {0} | |
run: | | |
python -m pip install --no-deps git+https://github.com/MITgcm/xmitgcm.git petitRADTRANS==2.4.9 prt-phasecurve | |
python -m pip install -e . | |
conda list | |
- name: Run Tests | |
shell: bash -l {0} | |
run: | | |
py.test --cov=./ --cov-report=xml | |
- name: Upload code coverage to Codecov | |
uses: codecov/codecov-action@v1 | |
with: | |
file: ./coverage.xml | |
flags: unittests | |
env_vars: OS,PYTHON | |
name: codecov-umbrella | |
fail_ci_if_error: false |