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Check truth data
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actions-user committed Jun 4, 2024
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27 changes: 27 additions & 0 deletions code/validation/check_truth.txt
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Expand Up @@ -11414,3 +11414,30 @@ Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-

- The following locations are missing: ['Czechia'].

Latest check of truth data: 2024-06-04

WARNING
Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-europe/data-truth/ECDC/truncated_ECDC-Incident Deaths.csv' at 2024-05-25:

- The following locations are missing: ['Austria', 'Belgium', 'Croatia', 'Czechia', 'Denmark', 'Estonia', 'Greece', 'Hungary', 'Iceland', 'Ireland', 'Italy', 'Latvia', 'Luxembourg', 'Malta', 'Netherlands', 'Norway', 'Poland', 'Slovakia', 'Slovenia', 'Sweden'].

WARNING
Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-europe/data-truth/ECDC/truth_ECDC-Incident Cases.csv' at 2024-05-25:

- The following locations are missing: ['Croatia', 'Denmark', 'Estonia', 'Italy', 'Latvia'].

WARNING
Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-europe/data-truth/ECDC/truth_ECDC-Incident Deaths.csv' at 2024-05-25:

- The following locations are missing: ['Austria', 'Belgium', 'Croatia', 'Denmark', 'Estonia', 'Hungary', 'Iceland', 'Italy', 'Latvia', 'Luxembourg', 'Netherlands', 'Norway'].

WARNING
Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-europe/data-truth/ECDC/truncated_ECDC-Incident Cases.csv' at 2024-05-25:

- The following locations are missing: ['Belgium', 'Croatia', 'Cyprus', 'Denmark', 'Estonia', 'Italy', 'Latvia', 'Netherlands', 'Norway', 'Slovakia'].

WARNING
Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-europe/data-truth/OWID/truncated_OWID-Incident Hospitalizations.csv' at 2024-06-01:

- The following locations are missing: ['Czechia'].

11 changes: 7 additions & 4 deletions data-truth/README.md
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Expand Up @@ -77,11 +77,11 @@ indicating data expecting to be substanially revised.
Hungary, Ireland, Italy, Latvia, Liechtenstein, Lithuania, Malta,
Poland, Portugal, Romania, Slovakia, Slovenia, Sweden

- **Data warning!** Recent missing data for cases in: Belgium, Denmark,
Iceland, Latvia, and Luxembourg
- **Data warning!** Recent missing data for cases in: Croatia, Denmark,
Estonia, Italy, and Latvia

- **Data warning!** Recent missing data for deaths in: Denmark, Hungary,
Latvia, and Poland
- **Data warning!** Recent missing data for deaths in: Croatia, Denmark,
Estonia, Hungary, Italy, and Latvia

We further evaluate forecasts of cases and deaths against data provided
[ECDC](https://www.ecdc.europa.eu/), which we recommend using as the
Expand Down Expand Up @@ -137,6 +137,9 @@ account the truncation of the data.
The latest case/death data is plotted below, with the dashed line
indicating data expecting to be substanially revised.

## `geom_line()`: Each group consists of only one observation.
## ℹ Do you need to adjust the group aesthetic?

![Plot of cases](plots/Cases.svg) ![Plot of deaths](plots/Deaths.svg)

## Additional data sources
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1,007 changes: 505 additions & 502 deletions data-truth/plots/Cases.svg
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1,499 changes: 742 additions & 757 deletions data-truth/plots/Deaths.svg
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116 changes: 59 additions & 57 deletions data-truth/plots/Hospitalisations.svg
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1,515 changes: 656 additions & 859 deletions data-truth/plots/revisions-Cases.svg
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1,826 changes: 841 additions & 985 deletions data-truth/plots/revisions-Deaths.svg
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86 changes: 43 additions & 43 deletions data-truth/plots/revisions-Hospitalizations.svg
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