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Merge branch 'european-modelling-hubs:main' into main
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ValeriaMarras authored Jun 18, 2024
2 parents b19ec23 + 1ede071 commit 7b760c2
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32 changes: 32 additions & 0 deletions code/validation/check_truth.txt
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Expand Up @@ -11802,3 +11802,35 @@ Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-

- The following locations are missing: ['Netherlands'].

Latest check of truth data: 2024-06-18

WARNING
Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-europe/data-truth/ECDC/truncated_ECDC-Incident Cases.csv' at 2024-06-08:

- The following locations are missing: ['Belgium', 'Croatia', 'Cyprus', 'Denmark', 'Estonia', 'Italy', 'Latvia', 'Netherlands', 'Norway', 'Slovakia'].

WARNING
Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-europe/data-truth/ECDC/truncated_ECDC-Incident Deaths.csv' at 2024-06-08:

- The following locations are missing: ['Austria', 'Belgium', 'Croatia', 'Cyprus', 'Czechia', 'Denmark', 'Estonia', 'Greece', 'Hungary', 'Iceland', 'Ireland', 'Italy', 'Latvia', 'Luxembourg', 'Malta', 'Netherlands', 'Norway', 'Poland', 'Slovakia', 'Slovenia', 'Sweden'].

WARNING
Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-europe/data-truth/ECDC/truth_ECDC-Incident Cases.csv' at 2024-06-08:

- The following locations are missing: ['Croatia', 'Cyprus', 'Denmark', 'Estonia', 'Italy', 'Latvia'].

WARNING
Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-europe/data-truth/ECDC/truth_ECDC-Incident Deaths.csv' at 2024-06-08:

- The following locations are missing: ['Austria', 'Belgium', 'Croatia', 'Cyprus', 'Denmark', 'Estonia', 'Hungary', 'Iceland', 'Italy', 'Latvia', 'Luxembourg', 'Netherlands', 'Norway'].

WARNING
Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-europe/data-truth/OWID/truncated_OWID-Incident Hospitalizations.csv' at 2024-06-08:

- The following locations are missing: ['Netherlands'].

WARNING
Error(s) in '/home/runner/work/covid19-forecast-hub-europe/covid19-forecast-hub-europe/data-truth/OWID/truth_OWID-Incident Hospitalizations.csv' at 2024-06-15:

- The following locations are missing: ['Netherlands'].

19 changes: 7 additions & 12 deletions data-truth/README.md
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Expand Up @@ -69,19 +69,19 @@ indicating data expecting to be substanially revised.
### Cases and deaths

- Cases: Austria, Belgium, Bulgaria, Croatia, Cyprus, Czechia, Denmark,
Estonia, Greece, Hungary, Iceland, Ireland, Italy, Latvia,
Liechtenstein, Lithuania, Luxembourg, Malta, Netherlands, Norway,
Poland, Portugal, Romania, Slovakia, Slovenia, Sweden
Estonia, Greece, Hungary, Iceland, Ireland, Italy, Liechtenstein,
Lithuania, Luxembourg, Malta, Netherlands, Norway, Poland, Portugal,
Romania, Slovakia, Slovenia, Sweden

- Deaths: Bulgaria, Croatia, Cyprus, Czechia, Denmark, Estonia, Greece,
Ireland, Italy, Latvia, Liechtenstein, Lithuania, Malta, Poland,
Portugal, Romania, Slovakia, Slovenia, Sweden
Ireland, Italy, Liechtenstein, Lithuania, Malta, Poland, Portugal,
Romania, Slovakia, Slovenia, Sweden

- **Data warning!** Recent missing data for cases in: Croatia, Cyprus,
Denmark, Italy, and Latvia
Denmark, Estonia, and Italy

- **Data warning!** Recent missing data for deaths in: Croatia, Cyprus,
Denmark, Italy, and Latvia
Denmark, Estonia, and Italy

We further evaluate forecasts of cases and deaths against data provided
[ECDC](https://www.ecdc.europa.eu/), which we recommend using as the
Expand Down Expand Up @@ -137,11 +137,6 @@ account the truncation of the data.
The latest case/death data is plotted below, with the dashed line
indicating data expecting to be substanially revised.

## `geom_line()`: Each group consists of only one observation.
## ℹ Do you need to adjust the group aesthetic?
## `geom_line()`: Each group consists of only one observation.
## ℹ Do you need to adjust the group aesthetic?

![Plot of cases](plots/Cases.svg) ![Plot of deaths](plots/Deaths.svg)

## Additional data sources
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