Check Truth #1016
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| name: Check Truth | |
| # Controls when the action will run. | |
| on: | |
| workflow_dispatch: | |
| schedule: | |
| - cron: "0 13 * * *" | |
| jobs: | |
| build: | |
| if: github.repository_owner == 'covid19-forecast-hub-europe' | |
| runs-on: ubuntu-latest | |
| env: | |
| RSPM: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest" | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| install-r: false | |
| use-public-rspm: true | |
| - name: Setup Python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: '3.x' # Version range or exact version of a Python version to use, using SemVer's version range syntax | |
| architecture: 'x64' # optional x64 or x86. Defaults to x64 if not specified | |
| - name: Install python requirements | |
| run: | | |
| pip3 install pandas pyprojroot | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - name: Install R system requirements | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install libcurl4-openssl-dev libicu-dev | |
| - uses: r-lib/actions/setup-renv@v2 | |
| - name: Verify truth data | |
| run: | | |
| python3 code/validation/check_truth.py | |
| - name: Check data for revisions | |
| run: | | |
| Rscript code/auto_download/check_revisions.R | |
| - name: Create status page | |
| run: | | |
| Rscript -e 'rmarkdown::render("data-truth/README.Rmd")' | |
| - name: Commit files | |
| run: | | |
| git config user.email "[email protected]" | |
| git config user.name "GitHub Action - check truth" | |
| git add --all | |
| git commit -m "Check truth data" | |
| git pull --rebase origin main | |
| git push | |
| echo "pushed to github" | |
| - name: Create issue about failure | |
| if: failure() && github.event_name != 'workflow_dispatch' | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| run: | | |
| gh issue reopen 2630 |