Visualisation #1854

	name: "Visualisation"
	on:
	workflow_dispatch:
	schedule:
	- cron: "0 8,12 * * *"

	jobs:
	create-files:
	if: github.repository_owner == 'covid19-forecast-hub-europe'
	runs-on: ubuntu-latest
	env:
	GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}

	steps:
	- uses: actions/checkout@v3

	- name: Setup Python
	uses: actions/setup-python@v2
	with:
	python-version: '3.x' # Version range or exact version of a Python version to use, using SemVer's version range syntax
	architecture: 'x64' # optional x64 or x86. Defaults to x64 if not specified

	- name: Install python requirements
	run: \|
	pip3 install -r github-actions/viz_requirements.txt

	- uses: r-lib/actions/setup-r@v2
	with:
	install-r: false
	use-public-rspm: true

	- name: Install system dependencies
	run: \|
	sudo apt-get update
	sudo apt-get install libcurl4-openssl-dev

	- uses: r-lib/actions/setup-renv@v2

	- name: Prepare truth data
	run: Rscript viz/prepare_truth_data.R

	- name: Prepare metadata
	run: Rscript viz/prepare_metadata.R

	- name: Visualization (python)
	run: \|
	python3 ./viz/prepare_forecast_data.py

	- name: Upload files to Azure blob storage
	env:
	AZURE_STORAGE_ENDPOINT: ${{ secrets.AZURE_STORAGE_ENDPOINT }}
	AZURE_STORAGE_KEY: ${{ secrets.AZURE_STORAGE_KEY }}
	run: Rscript viz/upload_to_azure.R

	- name: Create issue about failure
	if: failure() && github.event_name != 'workflow_dispatch'
	env:
	GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
	run: \|
	gh issue reopen 2636

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