Update publications #53
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| on: | |
| workflow_dispatch: | |
| schedule: | |
| - cron: '0 5 1 * *' | |
| name: Update publications | |
| jobs: | |
| update-bibtex: | |
| runs-on: ubuntu-latest | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| install-r: false | |
| use-public-rspm: true | |
| - name: Install system dependencies | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install libcurl4-openssl-dev | |
| - uses: r-lib/actions/setup-renv@v2 | |
| - name: Create bibtex file with selected entries | |
| run: | | |
| gh_repository <- "${{ github.repository }}" | |
| source("snippets/update_publications.R") | |
| shell: Rscript {0} | |
| - uses: peter-evans/create-pull-request@v6 | |
| id: cpr | |
| with: | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| commit-message: Automated update of team publications | |
| committer: epiforecasts-bot <[email protected]> | |
| author: epiforecasts-bot <[email protected]> | |
| branch: pubs | |
| branch-suffix: timestamp | |
| add-paths: _data/papers.bib | |
| title: Automated update of team publications | |
| delete-branch: true | |
| fetch-new-papers: | |
| needs: update-bibtex | |
| if: always() | |
| runs-on: ubuntu-latest | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| install-r: false | |
| use-public-rspm: true | |
| - name: Install system dependencies | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install libcurl4-openssl-dev | |
| - uses: r-lib/actions/setup-renv@v2 | |
| - name: Post a comment listing new papers | |
| run: source("snippets/post_publication.R") | |
| shell: Rscript {0} |