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rename simulate_infections -> forecast_infections #544

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merged 3 commits into from
Feb 14, 2024
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@sbfnk sbfnk commented Feb 12, 2024

This is in line with the discussion in #509 and renames simulate_infections to forecast_infections. This now follows the same terminology of simulate_secondary and forecast_secondary: a forecast is done from a fit to existing data, a simulation from first principles. We could also do it the other way round and change the ..._secondary function names but this version made more sense to me.

Deprecation of simulate_infections is transient until a new function simulating from given parameters / initial conditions has been implemented.

@sbfnk sbfnk force-pushed the forecast-infections branch from b3fe534 to 782c8e9 Compare February 12, 2024 11:47
@seabbs seabbs self-requested a review February 14, 2024 11:36
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seabbs previously approved these changes Feb 14, 2024
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Nice. This is good to go.

NEWS.md Outdated Show resolved Hide resolved
@seabbs seabbs enabled auto-merge (squash) February 14, 2024 13:49
@seabbs seabbs merged commit 669be3b into main Feb 14, 2024
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@seabbs seabbs deleted the forecast-infections branch February 14, 2024 14:36
sbfnk added a commit that referenced this pull request May 3, 2024
* rename simulate_infections -> forecast_infections

* Apply suggestions from code review

Co-authored-by: Sam Abbott <[email protected]>

* fix typo

---------

Co-authored-by: Sam Abbott <[email protected]>
sbfnk added a commit that referenced this pull request May 3, 2024
* rename simulate_infections -> forecast_infections

* Apply suggestions from code review

Co-authored-by: Sam Abbott <[email protected]>

* fix typo

---------

Co-authored-by: Sam Abbott <[email protected]>
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2 participants