Fix doc of secondary_opts()

epiforecasts · Nov 15, 2023 · 8facc22 · 8facc22
1 parent 3f42d98
commit 8facc22
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Showing 8 changed files with 25 additions and 24 deletions.
diff --git a/R/estimate_secondary.R b/R/estimate_secondary.R
@@ -252,9 +252,9 @@ estimate_secondary <- function(reports,
 #' @param ... Overwrite options defined by type. See the returned values for all
 #' options that can be passed.
 #' @importFrom rlang arg_match
-#' @seealso estimate_secondary
+#' @seealso [estimate_secondary()]
 #' @return A `<secondary_opts>` object of binary options summarising secondary
-#' model used in `estimate_secondary()`. Options returned are `cumulative`
+#' model used in [estimate_secondary()]. Options returned are `cumulative`
 #' (should the secondary report be cumulative), `historic` (should a
 #' convolution of primary reported cases be used to predict secondary reported
 #' cases), `primary_hist_additive` (should the historic convolution of primary

diff --git a/man/calc_summary_stats.Rd b/man/calc_summary_stats.Rd
diff --git a/man/estimate_secondary.Rd b/man/estimate_secondary.Rd
diff --git a/man/extract_CrIs.Rd b/man/extract_CrIs.Rd
diff --git a/man/regional_epinow.Rd b/man/regional_epinow.Rd
diff --git a/man/secondary_opts.Rd b/man/secondary_opts.Rd
diff --git a/man/setup_logging.Rd b/man/setup_logging.Rd
diff --git a/man/summarise_key_measures.Rd b/man/summarise_key_measures.Rd