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Update NEWS.md
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Co-authored-by: James Azam <[email protected]>
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seabbs and jamesmbaazam authored Aug 28, 2024
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- The interface for defining delay distributions has been generalised to also cater for continuous distributions
- When defining probability distributions these can now be truncated using the `tolerance` argument
- Ornstein-Uhlenbeck and 5 / 2 Matérn kernels have been added. By @sbfnk in #741 and reviewed by @seabbs.
- Gaussian processes have been vectorised and the `gp_opts()` function has been updated to allow for the specification of periodic and linear kernels. By @seabbs in #742 and reviewed by @jamesmbaazam.
- Gaussian processes have been vectorised, leading to some speed gains 🚀 , and the `gp_opts()` function has gained three more options, "periodic", "ou", and "se", to specify periodic and linear kernels respectively. By @seabbs in #742 and reviewed by @jamesmbaazam.
- Prior predictive checks have been used to update the following priors: the prior on the magnitude of the Gaussian process (from HalfNormal(0, 1) to HalfNormal(0, 0.1)), and the prior on the overdispersion (from 1 / HalfNormal(0, 1)^2 to 1 / HalfNormal(0, 0.25)). By @seabbs in #742 and reviewed by @jamesmbaazam.
- The default stan control options have been updated from `list(adapt_delta = 0.95, max_treedepth = 15)` to `list(adapt_delta = 0.9, max_treedepth = 12)` due to improved performance and to reduce the runtime of the default parameterisations. By @seabbs in #742 and reviewed by @jamesmbaazam.
- Initialisation has been simplified by sampling directly from the priors, where possible, rather than from a constrained space. By @seabbs in #742 and reviewed by @jamesmbaazam.
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