Claire Rioualen - Jun. 29th, 2017
This package was developed as part of the France Genomique Workpackage 2.6 - Gene Regulation.
It contains shared code for the analysis of Next Generation Sequencing data related to gene regulation: ChIP-seq, RNA-seq, and related technologies.
Current version: 4.0.
We have chosen to use the Snakemake workflow management system[1] in order to build reproducible and flexible NGS analysis pipelines.
A full documentation can be found on Read The Docs.
- Claire Rioualen [email protected]
- Jacques van Helden [email protected]
- Köster, Johannes and Rahmann, Sven. "Snakemake - A scalable bioinformatics workflow engine". Bioinformatics 2012.