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V2.0
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lfaino authored and lfaino committed Nov 6, 2018
1 parent 93c66fc commit cd0d846
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2 changes: 1 addition & 1 deletion Dockerfile
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Expand Up @@ -44,7 +44,7 @@ RUN git clone https://github.com/samtools/htslib.git && cd htslib && autoheader
cd tabix && make && cd .. && git clone https://github.com/samtools/samtools.git && cd samtools && autoheader &&\
autoconf -Wno-syntax && ./configure && make && sudo make install

RUN apt-get install -y -q libcurl4-gnutls-dev libssl-dev
RUN apt-get update && apt-get install -y -q --fix-missing libcurl4-gnutls-dev libssl-dev

RUN export TOOLDIR=/opt/LoReAn/third_party/software && git clone https://github.com/Gaius-Augustus/Augustus.git &&\
mv Augustus augustus && cd augustus && make clean && make
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