don't use modextrapaths to update $PYTHONPATH with standard path …

…to installed Python packages (`lib/python%(pyshortver)s/site-packages`)
easybuilders · Dec 18, 2024 · b2e7ee7 · b2e7ee7
1 parent f4eb430
commit b2e7ee7
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Showing 14 changed files with 3 additions and 46 deletions.
diff --git a/easybuild/easyconfigs/a/Arrow/Arrow-17.0.0-gfbf-2024a.eb b/easybuild/easyconfigs/a/Arrow/Arrow-17.0.0-gfbf-2024a.eb
@@ -75,8 +75,6 @@ exts_list = [
     }),
 ]
 
-modextrapaths = {'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages'}
-
 sanity_check_paths = {
     'files': ['lib/libarrow.a', 'lib/libarrow.%s' % SHLIB_EXT,
               'lib/python%%(pyshortver)s/site-packages/pyarrow/libarrow_python.%s' % SHLIB_EXT],

diff --git a/easybuild/easyconfigs/b/BindCraft/BindCraft-1.1.0-foss-2023a-CUDA-12.1.1.eb b/easybuild/easyconfigs/b/BindCraft/BindCraft-1.1.0-foss-2023a-CUDA-12.1.1.eb
@@ -76,10 +76,7 @@ fix_python_shebang_for = ['bindcraft.py']
 
 postinstallcmds = ['chmod a+x %(installdir)s/bindcraft.py']
 
-modextrapaths = {
-    'PATH': '',
-    'PYTHONPATH': ['', 'lib/python%(pyshortver)s/site-packages'],
-}
+modextrapaths = {'PATH': ''}
 
 sanity_check_paths = {
     'files': ['bindcraft.py'],

diff --git a/easybuild/easyconfigs/b/BindCraft/BindCraft-1.1.0-foss-2023a.eb b/easybuild/easyconfigs/b/BindCraft/BindCraft-1.1.0-foss-2023a.eb
@@ -74,10 +74,7 @@ fix_python_shebang_for = ['bindcraft.py']
 
 postinstallcmds = ['chmod a+x %(installdir)s/bindcraft.py']
 
-modextrapaths = {
-    'PATH': '',
-    'PYTHONPATH': ['', 'lib/python%(pyshortver)s/site-packages'],
-}
+modextrapaths = {'PATH': ''}
 
 sanity_check_paths = {
     'files': ['bindcraft.py'],

diff --git a/easybuild/easyconfigs/c/CPPE/CPPE-0.3.1-GCC-12.3.0.eb b/easybuild/easyconfigs/c/CPPE/CPPE-0.3.1-GCC-12.3.0.eb
@@ -41,6 +41,4 @@ sanity_check_paths = {
     'dirs': ['include/cppe', 'lib/python%(pyshortver)s/site-packages', 'share/cmake'],
 }
 
-modextrapaths = {'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages'}
-
 moduleclass = 'chem'
diff --git a/easybuild/easyconfigs/c/Cellformer/Cellformer-20240917-foss-2023a-R-4.3.2.eb b/easybuild/easyconfigs/c/Cellformer/Cellformer-20240917-foss-2023a-R-4.3.2.eb
@@ -150,10 +150,7 @@ exts_list = [
     }),
 ]
 
-modextrapaths = {
-    'PATH': '',
-    'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages',
-}
+modextrapaths = {'PATH': ''}
 
 fix_python_shebang_for = [
     'src/*/*.py',

diff --git a/easybuild/easyconfigs/g/GDAL/GDAL-3.10.0-foss-2024a.eb b/easybuild/easyconfigs/g/GDAL/GDAL-3.10.0-foss-2024a.eb
@@ -76,6 +76,4 @@ sanity_check_paths = {
 
 sanity_check_commands = ["python -c 'import osgeo.%(namelower)s'"]
 
-modextrapaths = {'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages'}
-
 moduleclass = 'data'
diff --git a/easybuild/easyconfigs/g/GROMACS/GROMACS-2023.4-foss-2023a.eb b/easybuild/easyconfigs/g/GROMACS/GROMACS-2023.4-foss-2023a.eb
@@ -77,8 +77,4 @@ exts_list = [
     }),
 ]
 
-modextrapaths = {
-    'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages',
-}
-
 moduleclass = 'bio'
diff --git a/easybuild/easyconfigs/g/GROMACS/GROMACS-2024.4-foss-2023b-CUDA-12.4.0-PLUMED-2.9.2.eb b/easybuild/easyconfigs/g/GROMACS/GROMACS-2024.4-foss-2023b-CUDA-12.4.0-PLUMED-2.9.2.eb
@@ -88,8 +88,4 @@ exts_list = [
     }),
 ]
 
-modextrapaths = {
-    'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages',
-}
-
 moduleclass = 'bio'
diff --git a/easybuild/easyconfigs/g/GROMACS/GROMACS-2024.4-foss-2023b-CUDA-12.4.0.eb b/easybuild/easyconfigs/g/GROMACS/GROMACS-2024.4-foss-2023b-CUDA-12.4.0.eb
@@ -81,8 +81,4 @@ exts_list = [
     }),
 ]
 
-modextrapaths = {
-    'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages',
-}
-
 moduleclass = 'bio'
diff --git a/easybuild/easyconfigs/g/GROMACS/GROMACS-2024.4-foss-2023b-PLUMED-2.9.2.eb b/easybuild/easyconfigs/g/GROMACS/GROMACS-2024.4-foss-2023b-PLUMED-2.9.2.eb
@@ -87,8 +87,4 @@ exts_list = [
     }),
 ]
 
-modextrapaths = {
-    'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages',
-}
-
 moduleclass = 'bio'
diff --git a/easybuild/easyconfigs/g/GROMACS/GROMACS-2024.4-foss-2023b.eb b/easybuild/easyconfigs/g/GROMACS/GROMACS-2024.4-foss-2023b.eb
@@ -79,8 +79,4 @@ exts_list = [
     }),
 ]
 
-modextrapaths = {
-    'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages',
-}
-
 moduleclass = 'bio'
diff --git a/easybuild/easyconfigs/p/Parsnp/Parsnp-2.1.1-foss-2023b.eb b/easybuild/easyconfigs/p/Parsnp/Parsnp-2.1.1-foss-2023b.eb
@@ -81,8 +81,4 @@ modextravars = {
     'PARSNPDIR': '',
 }
 
-modextrapaths = {
-    'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages',
-}
-
 moduleclass = 'bio'
diff --git a/easybuild/easyconfigs/p/PySCF/PySCF-2.7.0-foss-2023a.eb b/easybuild/easyconfigs/p/PySCF/PySCF-2.7.0-foss-2023a.eb
@@ -131,6 +131,4 @@ sanity_check_paths = {
 
 sanity_check_commands = ["python -c 'import pyscf'"]
 
-modextrapaths = {'PYTHONPATH': _py_site_packages}
-
 moduleclass = 'chem'
diff --git a/easybuild/easyconfigs/p/pyWannier90/pyWannier90-2024-01-28-foss-2023a.eb b/easybuild/easyconfigs/p/pyWannier90/pyWannier90-2024-01-28-foss-2023a.eb
@@ -68,6 +68,4 @@ sanity_check_commands = [
     "python -c 'import pywannier90'",
 ]
 
-modextrapaths = {'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages'}
-
 moduleclass = 'chem'
Original file line number	Diff line number	Diff line change
Expand Up		@@ -76,6 +76,4 @@ sanity_check_paths = {

		sanity_check_commands = ["python -c 'import osgeo.%(namelower)s'"]

		modextrapaths = {'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages'}

		moduleclass = 'data'
Original file line number	Diff line number	Diff line change
Expand Up		@@ -131,6 +131,4 @@ sanity_check_paths = {

		sanity_check_commands = ["python -c 'import pyscf'"]

		modextrapaths = {'PYTHONPATH': _py_site_packages}

		moduleclass = 'chem'