refresh-data #2349
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| name: refresh-data | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| tags: | |
| description: | |
| "run from cmdline" | |
| schedule: | |
| - cron: '30 1 * * THU' | |
| push: | |
| branches: | |
| - master | |
| - main | |
| jobs: | |
| refresh-data: | |
| runs-on: ubuntu-latest | |
| env: | |
| R_CONFIG_ACTIVE: github | |
| GITHUB_PAT: ${{ secrets.DJPRDASHDATA_PAT }} | |
| PG_MASTER_USER: ${{ secrets.PG_MASTER_USER }} | |
| PG_MASTER_PW: ${{ secrets.PG_MASTER_PW }} | |
| PG_READ_OPEN_USER: ${{ secrets.PG_READ_OPEN_USER }} | |
| PG_READ_OPEN_PW: ${{ secrets.PG_READ_OPEN_PW }} | |
| IVI_REGIONS: ${{ vars.IVI_REGIONS }} | |
| IVI_ANZSCO4: ${{ vars.IVI_ANZSCO4 }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Installing extra system dependencies | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y --fix-missing libcurl4-openssl-dev | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: 'renv' # The R version to download (if necessary) and use. | |
| - uses: r-lib/actions/setup-renv@v2 | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - name: Get Github action IP | |
| id: ip | |
| uses: haythem/[email protected] | |
| - name: Set AWS environment variables | |
| run: | | |
| echo "AWS_DEFAULT_REGION=ap-southeast-2" >> $GITHUB_ENV | |
| echo "AWS_SG_NAME=sg-0b7365fabbbc1c55b" >> $GITHUB_ENV | |
| - name: Add Github Actions IP to Security group | |
| run: | | |
| aws ec2 authorize-security-group-ingress --group-id ${{ env.AWS_SG_NAME }} --protocol tcp --port 5432 --cidr ${{ steps.ip.outputs.ipv4 }}/32 | |
| env: | |
| AWS_ACCESS_KEY_ID: ${{ secrets.AWS_ACCESS_KEY_ID }} | |
| AWS_SECRET_ACCESS_KEY: ${{ secrets.AWS_SECRET_ACCESS_KEY }} | |
| AWS_DEFAULT_REGION: ${{ env.AWS_DEFAULT_REGION }} | |
| - name: Get data | |
| run: Rscript -e 'source(here::here("data-raw", "refresh_data.R"), echo = TRUE)' | |
| - name: Render README | |
| run: Rscript -e 'rmarkdown::render(here::here("README.Rmd"))' | |
| - name: Commit | |
| run: | | |
| git config --global user.name 'Henry McMillan' | |
| git config --global user.email '[email protected]' | |
| git add . | |
| git commit -m 'refreshing data' || echo "No changes to commit" | |
| git push --force origin main || echo "No changes to commit" | |
| - name: Remove Github Actions IP from security group | |
| run: | | |
| aws ec2 revoke-security-group-ingress --group-id ${{ env.AWS_SG_NAME }} --protocol tcp --port 5432 --cidr ${{ steps.ip.outputs.ipv4 }}/32 | |
| env: | |
| AWS_ACCESS_KEY_ID: ${{ secrets.AWS_ACCESS_KEY_ID }} | |
| AWS_SECRET_ACCESS_KEY: ${{ secrets.AWS_SECRET_ACCESS_KEY }} | |
| AWS_DEFAULT_REGION: ${{ env.AWS_DEFAULT_REGION }} | |
| if: always() |