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Add doc for spin data format #3762

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merged 2 commits into from
May 9, 2024
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@hztttt hztttt commented May 9, 2024

Summary by CodeRabbit

  • Documentation
    • Updated documentation to clarify data format differences and detailed file structures for TensorFlow and PyTorch/DP backends.

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coderabbitai bot commented May 9, 2024

Walkthrough

Walkthrough

The documentation update provides a comprehensive overview of the changes made to the data formats in TensorFlow and PyTorch/DP backends. It clarifies the distinctions between the two formats and offers a detailed explanation of the structure and content of the relevant data files for each backend, aiding users in understanding the requirements for effective model training.

Changes

Files Changes Summary
type.raw, set.*/box.npy, set.*/coord.npy Common files detailed for structure and content in both TensorFlow and PyTorch/DP formats.
set.*/energy.npy, set.*/force.npy, set.*/force_mag.npy Explanation provided for these files in both TensorFlow and PyTorch/DP formats.
set.*/spin.npy Specific to PyTorch/DP; details on spin data format, including properties and units, outlined.

Recent Review Details

Configuration used: CodeRabbit UI
Review profile: CHILL

Commits Files that changed from the base of the PR and between a9aa3e8 and 2489599.
Files selected for processing (1)
  • doc/model/train-energy-spin.md (1 hunks)
Additional Context Used
LanguageTool (2)
doc/model/train-energy-spin.md (2)

Near line 24: In this context, ‘type’ should agree in number with the noun after ‘of’.
Context: ...tion, which sets the magnetism for each type of atoms as described in the following sections....


Near line 49: It seems that a comma is missing.
Context: ...pin implementation is more flexible and so far supports the following descriptors: - ...


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@github-actions github-actions bot added the Docs label May 9, 2024
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Actionable comments posted: 3

Out of diff range and nitpick comments (3)
doc/model/train-energy-spin.md (3)

Line range hint 24-24: Consider revising the phrase "each type of atoms" to "each type of atom" for grammatical correctness.


Line range hint 49-49: Consider adding a comma after "flexible" for better readability and grammatical correctness.


Line range hint 96-104: Replace hard tabs with spaces in the JSON examples to maintain consistency and improve readability in markdown files.

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Actionable comments posted: 1

Out of diff range and nitpick comments (3)
doc/model/train-energy-spin.md (3)

Line range hint 24-24: Correct grammatical agreement in the description.

- type of atoms
+ types of atoms

Line range hint 49-49: Consider adding a comma for clarity in the list of descriptors.

- flexible and so far supports
+ flexible, and so far supports

Line range hint 96-104: Replace hard tabs with spaces in JSON blocks for consistent formatting.

- "type":		        "ener_spin",
- "start_pref_e":	    0.02,
- "limit_pref_e":	    1,
- "start_pref_fr":	1000,
- "limit_pref_fr":	1.0,
- "start_pref_fm":	10000,
- "limit_pref_fm":	10.0,
- "start_pref_v":	    0,
- "limit_pref_v":	    0,
+ "type":              "ener_spin",
+ "start_pref_e":      0.02,
+ "limit_pref_e":      1,
+ "start_pref_fr":     1000,
+ "limit_pref_fr":     1.0,
+ "start_pref_fm":     10000,
+ "limit_pref_fm":     10.0,
+ "start_pref_v":      0,
+ "limit_pref_v":      0,

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codecov bot commented May 9, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 82.25%. Comparing base (3b59e2b) to head (2489599).

Additional details and impacted files
@@           Coverage Diff           @@
##            devel    #3762   +/-   ##
=======================================
  Coverage   82.25%   82.25%           
=======================================
  Files         513      513           
  Lines       47666    47666           
  Branches     2981     2981           
=======================================
  Hits        39207    39207           
  Misses       7548     7548           
  Partials      911      911           

☔ View full report in Codecov by Sentry.
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@iProzd iProzd requested review from iProzd and wanghan-iapcm May 9, 2024 12:39
@wanghan-iapcm wanghan-iapcm added this pull request to the merge queue May 9, 2024
Merged via the queue into deepmodeling:devel with commit 7ab3040 May 9, 2024
60 checks passed
mtaillefumier pushed a commit to mtaillefumier/deepmd-kit that referenced this pull request Sep 18, 2024
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit

- **Documentation**
- Updated documentation to clarify data format differences and detailed
file structures for TensorFlow and PyTorch/DP backends.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->

---------

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
@njzjz njzjz linked an issue Sep 20, 2024 that may be closed by this pull request
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[Feature Request] Data format doc for spin model.
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