chore(mi): Straglr debug logging

davidlougheed · Nov 13, 2024 · 57107db · 57107db
1 parent 95a2e0d
commit 57107db
Showing 1 changed file with 3 additions and 1 deletion.
diff --git a/strkit/mi/straglr.py b/strkit/mi/straglr.py
@@ -38,14 +38,16 @@ def make_calls_dict(self, ph, contig, cr: Optional[MIContigResult] = None):
 
             overlapping = self.get_loci_overlapping(k[0], k[1], k[2], True)
 
-            if self.should_skip_locus(k[0], k[1], k[2], cached_overlapping=overlapping):
+            if r := self.should_skip_locus(k[0], k[1], k[2], cached_overlapping=overlapping):
+                self._logger.debug(f"Skipping locus {k}: {r}")
                 continue
 
             if cr:
                 cr.seen_locus(*k)
 
             orig_motif: str = overlapping[0][-1][0]
             if not orig_motif:  # false-y/blank
+                self._logger.debug(f"Skipping locus {k}: motif is false-y")
                 continue
 
             # Transform the genotypes into something that is consistent across individuals,