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print debug
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davidlougheed committed Dec 19, 2024
1 parent fedf4a8 commit 143adf4
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1 change: 1 addition & 0 deletions strkit/call/call_locus.py
Original file line number Diff line number Diff line change
Expand Up @@ -1109,6 +1109,7 @@ def get_read_length_partition_mean(p_idx: int) -> float:
# Set initial integer copy number guess based on aligned TR size, plus the previous read offset (how much the
# last guess was wrong by, as a delta.)
read_sc = round(tr_len / motif_size)
print(round(read_offset_frac_from_starting_guess * read_sc))
read_sc += round(read_offset_frac_from_starting_guess * read_sc)
(read_cn, read_cn_score), n_read_cn_iters, new_offset_from_starting_count = get_repeat_count(
start_count=max(read_sc, 0),
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