Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

DISEASES (https://diseases.jensenlab.org/) is a weekly updated web resource that integrates evidence on disease-gene associations from automatic text mining, manually curated literature, cancer mutation data, and genome-wide association studies. We further unify the evidence by assigning confidence scores that facilitate comparison of the different types and sources of evidence. It is under the CC-BY license. #742

Merged
merged 1 commit into from
Dec 11, 2023

Conversation

copybara-service[bot]
Copy link
Contributor

DISEASES (https://diseases.jensenlab.org/) is a weekly updated web resource that integrates evidence on disease-gene associations from automatic text mining, manually curated literature, cancer mutation data, and genome-wide association studies. We further unify the evidence by assigning confidence scores that facilitate comparison of the different types and sources of evidence. It is under the CC-BY license.

This import brings in all of the DISEASES data sources: experimental, manual, and text mining curation. It divides each source into coding and non-coding genes and formats it into csv+tmcf pairs. These formatted data have passed the json tool (output report.jsons listed below) and the internal v3 staging tool.

@copybara-service copybara-service bot force-pushed the copybara2git_587926885 branch from 742e90b to acad378 Compare December 5, 2023 22:24
@copybara-service copybara-service bot force-pushed the copybara2git_587926885 branch from acad378 to 7212627 Compare December 6, 2023 05:59
@copybara-service copybara-service bot force-pushed the copybara2git_587926885 branch from 7212627 to 965ece4 Compare December 11, 2023 17:56
…source that integrates evidence on disease-gene associations from automatic text mining, manually curated literature, cancer mutation data, and genome-wide association studies. We further unify the evidence by assigning confidence scores that facilitate comparison of the different types and sources of evidence. It is under the CC-BY license.

This import brings in all of the DISEASES data sources: experimental, manual, and text mining curation. It divides each source into coding and non-coding genes and formats it into csv+tmcf pairs. These formatted data have passed the json tool (output report.jsons listed below) and the internal v3 staging tool.

PiperOrigin-RevId: 589858154
@copybara-service copybara-service bot force-pushed the copybara2git_587926885 branch from 965ece4 to 68e4cd0 Compare December 11, 2023 18:02
@copybara-service copybara-service bot merged commit 68e4cd0 into main Dec 11, 2023
@copybara-service copybara-service bot deleted the copybara2git_587926885 branch December 11, 2023 18:02
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant