Deploying to gh-pages from @ 2157b18 🚀

2019/01/07/example-post-1.html

@@ -62,10 +62,10 @@
 
   <meta name="author" content="sarah-johnson">
   <meta property="og:type" content="article">
-  <meta property="og:updated_time" content="2024-11-14T22:48:54+00:00">
+  <meta property="og:updated_time" content="2024-11-27T15:19:03+00:00">
   <meta property="article:published_time" content="2019-01-07T00:00:00+00:00">
-  <meta property="article:modified_time" content="2024-11-14T22:48:54+00:00">
-  <meta name="revised" content="2024-11-14T22:48:54+00:00">
+  <meta property="article:modified_time" content="2024-11-27T15:19:03+00:00">
+  <meta name="revised" content="2024-11-27T15:19:03+00:00">
 
 
 <script type="application/ld+json">
@@ -75,7 +75,7 @@
       "@type": "BlogPosting",
       "author": { "@type": "Person", "name": "Example post 1" },
       "datePublished": "2019-01-07T00:00:00+00:00",
-      "dateModified": "2024-11-14T22:48:54+00:00",
+      "dateModified": "2024-11-27T15:19:03+00:00",
 
     "name": "Example post 1",
     "description": "This is the website for the Dashnow Lab. We do computational genomics in the Department of Biomedical Informatics at the University of Colorado Anschutz Medical Campus.",
@@ -421,7 +421,7 @@ <h1 class="center">Example post 1</h1>
 
     <span data-tooltip="Last updated on">
       <i class="icon fa-solid fa-clock-rotate-left"></i>
-      <span>November 14, 2024</span>
+      <span>November 27, 2024</span>
     </span>
 
 </div>

2021/09/30/example-post-2.html

@@ -62,10 +62,10 @@
 
   <meta name="author" content="jane-smith">
   <meta property="og:type" content="article">
-  <meta property="og:updated_time" content="2024-11-14T22:48:54+00:00">
+  <meta property="og:updated_time" content="2024-11-27T15:19:03+00:00">
   <meta property="article:published_time" content="2021-09-30T00:00:00+00:00">
-  <meta property="article:modified_time" content="2024-11-14T22:48:54+00:00">
-  <meta name="revised" content="2024-11-14T22:48:54+00:00">
+  <meta property="article:modified_time" content="2024-11-27T15:19:03+00:00">
+  <meta name="revised" content="2024-11-27T15:19:03+00:00">
 
 
 <script type="application/ld+json">
@@ -75,7 +75,7 @@
       "@type": "BlogPosting",
       "author": { "@type": "Person", "name": "Example post 2" },
       "datePublished": "2021-09-30T00:00:00+00:00",
-      "dateModified": "2024-11-14T22:48:54+00:00",
+      "dateModified": "2024-11-27T15:19:03+00:00",
 
     "name": "Example post 2",
     "description": "This is the website for the Dashnow Lab. We do computational genomics in the Department of Biomedical Informatics at the University of Colorado Anschutz Medical Campus.",
@@ -421,7 +421,7 @@ <h1 class="center">Example post 2</h1>
 
     <span data-tooltip="Last updated on">
       <i class="icon fa-solid fa-clock-rotate-left"></i>
-      <span>November 14, 2024</span>
+      <span>November 27, 2024</span>
     </span>
 
 </div>

2023/02/23/example-post-3.html

@@ -62,10 +62,10 @@
 
   <meta name="author" content="john-doe">
   <meta property="og:type" content="article">
-  <meta property="og:updated_time" content="2024-11-14T22:48:54+00:00">
+  <meta property="og:updated_time" content="2024-11-27T15:19:03+00:00">
   <meta property="article:published_time" content="2023-02-23T00:00:00+00:00">
-  <meta property="article:modified_time" content="2024-11-14T22:48:54+00:00">
-  <meta name="revised" content="2024-11-14T22:48:54+00:00">
+  <meta property="article:modified_time" content="2024-11-27T15:19:03+00:00">
+  <meta name="revised" content="2024-11-27T15:19:03+00:00">
 
 
 <script type="application/ld+json">
@@ -75,7 +75,7 @@
       "@type": "BlogPosting",
       "author": { "@type": "Person", "name": "Example post 3" },
       "datePublished": "2023-02-23T00:00:00+00:00",
-      "dateModified": "2024-11-14T22:48:54+00:00",
+      "dateModified": "2024-11-27T15:19:03+00:00",
 
     "name": "Example post 3",
     "description": "This is the website for the Dashnow Lab. We do computational genomics in the Department of Biomedical Informatics at the University of Colorado Anschutz Medical Campus.",
@@ -421,7 +421,7 @@ <h1 class="center">Example post 3</h1>
 
     <span data-tooltip="Last updated on">
       <i class="icon fa-solid fa-clock-rotate-left"></i>
-      <span>November 14, 2024</span>
+      <span>November 27, 2024</span>
     </span>
 
 </div>

feed.xml

@@ -1 +1 @@
-<?xml version="1.0" encoding="utf-8"?><feed xmlns="http://www.w3.org/2005/Atom" ><generator uri="https://jekyllrb.com/" version="4.3.2">Jekyll</generator><link href="/feed.xml" rel="self" type="application/atom+xml" /><link href="/" rel="alternate" type="text/html" /><updated>2024-11-14T22:50:34+00:00</updated><id>/feed.xml</id><title type="html">Dashnow Lab</title><subtitle>This is the website for the Dashnow Lab. We do computational genomics in the Department of Biomedical Informatics at the University of Colorado Anschutz Medical Campus.</subtitle><entry><title type="html">Example post 3</title><link href="/2023/02/23/example-post-3.html" rel="alternate" type="text/html" title="Example post 3" /><published>2023-02-23T00:00:00+00:00</published><updated>2024-11-14T22:48:54+00:00</updated><id>/2023/02/23/example-post-3</id><content type="html" xml:base="/2023/02/23/example-post-3.html"><![CDATA[<p>Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.</p>]]></content><author><name>john-doe</name></author><category term="biology," /><category term="medicine" /><summary type="html"><![CDATA[Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.]]></summary></entry><entry><title type="html">Example post 2</title><link href="/2021/09/30/example-post-2.html" rel="alternate" type="text/html" title="Example post 2" /><published>2021-09-30T00:00:00+00:00</published><updated>2024-11-14T22:48:54+00:00</updated><id>/2021/09/30/example-post-2</id><content type="html" xml:base="/2021/09/30/example-post-2.html"><![CDATA[<p>Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.</p>]]></content><author><name>jane-smith</name></author><summary type="html"><![CDATA[Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.]]></summary></entry><entry><title type="html">Example post 1</title><link href="/2019/01/07/example-post-1.html" rel="alternate" type="text/html" title="Example post 1" /><published>2019-01-07T00:00:00+00:00</published><updated>2024-11-14T22:48:54+00:00</updated><id>/2019/01/07/example-post-1</id><content type="html" xml:base="/2019/01/07/example-post-1.html"><![CDATA[<p>Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.</p>]]></content><author><name>sarah-johnson</name></author><category term="biology" /><category term="medicine" /><category term="big data" /><summary type="html"><![CDATA[Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.]]></summary></entry></feed>
+<?xml version="1.0" encoding="utf-8"?><feed xmlns="http://www.w3.org/2005/Atom" ><generator uri="https://jekyllrb.com/" version="4.3.2">Jekyll</generator><link href="/feed.xml" rel="self" type="application/atom+xml" /><link href="/" rel="alternate" type="text/html" /><updated>2024-11-27T15:20:57+00:00</updated><id>/feed.xml</id><title type="html">Dashnow Lab</title><subtitle>This is the website for the Dashnow Lab. We do computational genomics in the Department of Biomedical Informatics at the University of Colorado Anschutz Medical Campus.</subtitle><entry><title type="html">Example post 3</title><link href="/2023/02/23/example-post-3.html" rel="alternate" type="text/html" title="Example post 3" /><published>2023-02-23T00:00:00+00:00</published><updated>2024-11-27T15:19:03+00:00</updated><id>/2023/02/23/example-post-3</id><content type="html" xml:base="/2023/02/23/example-post-3.html"><![CDATA[<p>Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.</p>]]></content><author><name>john-doe</name></author><category term="biology," /><category term="medicine" /><summary type="html"><![CDATA[Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.]]></summary></entry><entry><title type="html">Example post 2</title><link href="/2021/09/30/example-post-2.html" rel="alternate" type="text/html" title="Example post 2" /><published>2021-09-30T00:00:00+00:00</published><updated>2024-11-27T15:19:03+00:00</updated><id>/2021/09/30/example-post-2</id><content type="html" xml:base="/2021/09/30/example-post-2.html"><![CDATA[<p>Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.</p>]]></content><author><name>jane-smith</name></author><summary type="html"><![CDATA[Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.]]></summary></entry><entry><title type="html">Example post 1</title><link href="/2019/01/07/example-post-1.html" rel="alternate" type="text/html" title="Example post 1" /><published>2019-01-07T00:00:00+00:00</published><updated>2024-11-27T15:19:03+00:00</updated><id>/2019/01/07/example-post-1</id><content type="html" xml:base="/2019/01/07/example-post-1.html"><![CDATA[<p>Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.</p>]]></content><author><name>sarah-johnson</name></author><category term="biology" /><category term="medicine" /><category term="big data" /><summary type="html"><![CDATA[Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.]]></summary></entry></feed>

members/akshay-avvaru.html

@@ -44,17 +44,17 @@
 <link rel="icon" href="/images/icon.png">
 
 <meta name="title" content="Akshay Avvaru">
-<meta name="description" content="Postdoc, joining soon!">
+<meta name="description" content="Postdoc">
 
 <meta property="og:title" content="Akshay Avvaru">
 <meta property="og:site_title" content="Dashnow Lab">
-<meta property="og:description" content="Postdoc, joining soon!">
+<meta property="og:description" content="Postdoc">
 <meta property="og:url" content="">
 <meta property="og:image" content="/images/share.jpg">
 <meta property="og:locale" content="en_US">
 
 <meta property="twitter:title" content="Akshay Avvaru">
-<meta property="twitter:description" content="Postdoc, joining soon!">
+<meta property="twitter:description" content="Postdoc">
 <meta property="twitter:url" content="">
 <meta property="twitter:card" content="summary_large_image">
 <meta property="twitter:image" content="/images/share.jpg">
@@ -70,7 +70,7 @@
       "@type": "WebSite",
 
     "name": "Akshay Avvaru",
-    "description": "Postdoc, joining soon!",
+    "description": "Postdoc",
     "headline": "Akshay Avvaru",
     "publisher": {
       "@type": "Organization",
@@ -391,7 +391,7 @@
 
 <div class="portrait-wrapper">
   <a class="portrait" data-style="" aria-label="Akshay Avvaru">
-    <img src="/images/photo.jpg" class="portrait-image" alt="member portrait" loading="lazy" onerror="this.src = '/images/fallback.svg'; this.onerror = null;">
+    <img src="/images/Akshay-Avvaru.jpg" class="portrait-image" alt="member portrait" loading="lazy" onerror="this.src = '/images/fallback.svg'; this.onerror = null;">
 
 
       <span class="portrait-text">
@@ -405,7 +405,7 @@
           <span class="portrait-role">
 
             <i class="icon fa-solid fa-glasses"></i>
-            <span>Postdoc, joining soon!</span>
+            <span>Postdoc</span>
           </span>
 
       </span>
@@ -421,7 +421,9 @@
 </div>
 
 
-<p>We are please to announce that Dr. Akshay Avvaru will be joining us soon! You can read more about Akshay’s work <a href="https://scholar.google.com/citations?user=jVBnGCwAAAAJ&hl=en">here</a>.</p>
+<p>Akshay Avvaru, PhD, is a postdoctoral fellow in the Dashnow Lab. Originally from Hyderabad, India, he earned his bachelor’s degree in biotechnology before becoming a research trainee in the Bioinformatics Department at the Centre for Cellular and Molecular Biology (CCMB) in Hyderabad. Following his training, he completed his PhD in bioinformatics at CCMB. As a postdoctoral fellow, Avvaru will study the dynamics of STR polymorphism by utilizing population-scale genome datasets, with a particular focus on loci linked to genetic diseases.</p>
+
+<p>You can read more about Akshay’s work <a href="https://scholar.google.com/citations?user=jVBnGCwAAAAJ&hl=en">here</a>.</p>
 
 
 

research/index.html

@@ -599,6 +599,43 @@ <h2 id="all">All</h2>
 
 <h3 id="2024">2024</h3>
 
+<div class="citation">
+
+    <a href="https://doi.org/g8q5v2" class="citation-image" aria-label="Polymorphic tandem repeats shape single-cell gene expression across the immune landscape">
+      <img src="https://www.biorxiv.org/content/biorxiv/early/2024/11/04/2024.11.02.621562/F1.large.jpg" alt="Polymorphic tandem repeats shape single-cell gene expression across the immune landscape" loading="lazy" onerror="this.src = '/images/fallback.svg'; this.onerror = null;">
+    </a>
+
+
+  <div class="citation-text">
+
+
+
+    <a href="https://doi.org/g8q5v2" class="citation-title">
+      Polymorphic tandem repeats shape single-cell gene expression across the immune landscape
+    </a>
+
+    <div class="citation-authors" data-tooltip="Hope A. Tanudisastro, Anna S.E. Cuomo, Ben Weisburd, Matthew Welland, Eleanor Spenceley, Michael Franklin, Angli Xue, Blake Bowen, Kristof Wing, Owen Tang, Michael Gray, Andre L.M. Reis, Jonathan Margoliash, Edibe Nehir Kurtas, Jeffrey Pullin, Arthur S. Lee, Harrison Brand, Michael Harper, Katalina Bobowik, Michael Silk, John Marshall, Vivian Bakiris, Bindu Swapna Madala, Caitlin Uren, Caitlin Bartie, Anne Senabouth, Harriet Dashnow, Liam Fearnley, Egor Dolzhenko, Zhen Qiao, Stuart Grieve, Tung Nguyen, Michael Talkowski, Stephen I. Alexander, Owen M. Siggs, Leonhard Gruenschloss, Hannah R. Nicholas, Jennifer Piscionere, Cas Simons, Chris Wallace, Melissa Gymrek, Ira W. Deveson, Alex W. Hewitt, Gemma A. Figtree, Katrina M. de Lange, Joseph E. Powell, Daniel G. MacArthur " tabindex="0">
+      Hope A. Tanudisastro, Anna S.E. Cuomo, Ben Weisburd, Matthew Welland, Eleanor Spenceley, ..., Alex W. Hewitt, Gemma A. Figtree, Katrina M. de Lange, Joseph E. Powell, Daniel G. MacArthur
+    </div>
+
+    <div class="citation-details">
+      Cold Spring Harbor Laboratory
+        ·  
+      04 Nov 2024
+        ·  
+      doi:10.1101/2024.11.02.621562
+    </div>
+
+
+
+
+
+
+
+
+  </div>
+</div>
+
 <div class="citation">
 
     <a href="https://doi.org/g75bj9" class="citation-image" aria-label="Defining a tandem repeat catalog and variation clusters for genome-wide analyses and population databases">

sitemap.xml

@@ -2,50 +2,50 @@
 <urlset xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.sitemaps.org/schemas/sitemap/0.9 http://www.sitemaps.org/schemas/sitemap/0.9/sitemap.xsd" xmlns="http://www.sitemaps.org/schemas/sitemap/0.9">
 <url>
 <loc>/members/akshay-avvaru.html</loc>
-<lastmod>2024-11-14T22:48:54+00:00</lastmod>
+<lastmod>2024-11-27T15:19:03+00:00</lastmod>
 </url>
 <url>
 <loc>/members/harriet-dashnow.html</loc>
-<lastmod>2024-11-14T22:48:54+00:00</lastmod>
+<lastmod>2024-11-27T15:19:03+00:00</lastmod>
 </url>
 <url>
 <loc>/members/laurel-hiatt.html</loc>
-<lastmod>2024-11-14T22:48:54+00:00</lastmod>
+<lastmod>2024-11-27T15:19:03+00:00</lastmod>
 </url>
 <url>
 <loc>/2019/01/07/example-post-1.html</loc>
-<lastmod>2024-11-14T22:48:54+00:00</lastmod>
+<lastmod>2024-11-27T15:19:03+00:00</lastmod>
 </url>
 <url>
 <loc>/2021/09/30/example-post-2.html</loc>
-<lastmod>2024-11-14T22:48:54+00:00</lastmod>
+<lastmod>2024-11-27T15:19:03+00:00</lastmod>
 </url>
 <url>
 <loc>/2023/02/23/example-post-3.html</loc>
-<lastmod>2024-11-14T22:48:54+00:00</lastmod>
+<lastmod>2024-11-27T15:19:03+00:00</lastmod>
 </url>
 <url>
 <loc>/contact/</loc>
-<lastmod>2024-11-14T22:48:54+00:00</lastmod>
+<lastmod>2024-11-27T15:19:03+00:00</lastmod>
 </url>
 <url>
 <loc>/team/</loc>
-<lastmod>2024-11-14T22:48:54+00:00</lastmod>
+<lastmod>2024-11-27T15:19:03+00:00</lastmod>
 </url>
 <url>
 <loc>/projects/</loc>
-<lastmod>2024-11-14T22:48:54+00:00</lastmod>
+<lastmod>2024-11-27T15:19:03+00:00</lastmod>
 </url>
 <url>
 <loc>/research/</loc>
-<lastmod>2024-11-14T22:48:54+00:00</lastmod>
+<lastmod>2024-11-27T15:19:03+00:00</lastmod>
 </url>
 <url>
 <loc>/</loc>
-<lastmod>2024-11-14T22:48:54+00:00</lastmod>
+<lastmod>2024-11-27T15:19:03+00:00</lastmod>
 </url>
 <url>
 <loc>/testbed.html</loc>
-<lastmod>2024-11-14T22:48:54+00:00</lastmod>
+<lastmod>2024-11-27T15:19:03+00:00</lastmod>
 </url>
 </urlset>

team/index.html

@@ -474,7 +474,7 @@ <h1 id="team">
 
 <div class="portrait-wrapper">
   <a href="/members/akshay-avvaru.html" class="portrait" data-style="" aria-label="Akshay Avvaru">
-    <img src="/images/photo.jpg" class="portrait-image" alt="member portrait" loading="lazy" onerror="this.src = '/images/fallback.svg'; this.onerror = null;">
+    <img src="/images/Akshay-Avvaru.jpg" class="portrait-image" alt="member portrait" loading="lazy" onerror="this.src = '/images/fallback.svg'; this.onerror = null;">
 
 
       <span class="portrait-text">
@@ -488,7 +488,7 @@ <h1 id="team">
           <span class="portrait-role">
 
             <i class="icon fa-solid fa-glasses"></i>
-            <span>Postdoc, joining soon!</span>
+            <span>Postdoc</span>
           </span>
 
       </span>