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[WIP] ENH: DAOS and DFS modules #205

[WIP] ENH: DAOS and DFS modules

[WIP] ENH: DAOS and DFS modules #205

#Test overview:
# Test the Darshan LDMS Integrated code (e.g. darshanConnector).
# Build and Compile lastest LDMS release
# Build and Compile Darshan against the latest LDMS library
# Run an MPI-IO Test from Darshan's test suites
# Check that the test completes normally and LDMS is collecting runtime timeseries data
# Check that the test completes with Darshan when LDMS variables are not set
name: Darshan-LDMS Integration Test - Latest
on:
push:
branches:
- main
pull_request:
branches:
- main
workflow_dispatch:
jobs:
test:
strategy:
matrix:
platform: [ubuntu-latest]
runs-on: ${{ matrix.platform }}
steps:
- uses: actions/checkout@v3
- name: Install dependencies
run: |
sudo apt-get update -y
sudo apt-get install openmpi-bin libopenmpi-dev
sudo apt-get install libjansson-dev
- name: Clone LDMS
uses: actions/checkout@v3
with:
repository: ovis-hpc/ovis
path: ovis
ref: OVIS-4
- name: Install LDMS
run: |
cd ovis
sh autogen.sh
set -e && mkdir -p build
pushd build
../configure --prefix=/opt/ovis-latest --enable-etc
make && make install
- name: Install Darshan
run: |
git submodule update --init
# build darshan against LDMS library
export DARSHAN_INSTALL_PREFIX=/opt/darshan_install
export DARSHAN_RUNTIME_CONFIG_ARGS="--enable-ldms-mod --with-ldms=/opt/ovis-latest --with-jobid-env=NONE"
darshan-test/automated/build-darshan.sh
- name: Test Preparation and Run
run : |
echo "---setting Darshan environment---"
export DARSHAN_INSTALL_PATH=/opt/darshan_install
export LD_PRELOAD=$DARSHAN_INSTALL_PATH/lib/libdarshan.so
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$DARSHAN_INSTALL_PATH/lib
echo "---setting Darshan-LDMS environment---"
export DARSHAN_LDMS_STREAM=darshanConnector
export DARSHAN_LDMS_PORT=10444
export DARSHAN_LDMS_HOST=localhost
export DARSHAN_LDMS_XPRT=sock
export DARSHAN_LDMS_AUTH=none
export DARSHAN_LDMS_ENABLE=
export DARSHAN_LDMS_ENABLE_MPIIO=
export DARSHAN_LDMS_ENABLE_POSIX=
export DARSHAN_LDMS_ENABLE_STDIO=
export DARSHAN_LDMS_ENABLE_HDF5=
echo "---setting Test Case Variables---"
export PROG=mpi-io-test
export DARSHAN_TMP=/tmp/darshan-ldms-test
export DARSHAN_TESTDIR=$PWD/darshan-test/regression
export DARSHAN_LOGFILE=$DARSHAN_TMP/${PROG}.darshan
echo "---checking TMP Path---"
if [ ! -d $DARSHAN_TMP ]; then
mkdir -p $DARSHAN_TMP
fi
if [ ! -d $DARSHAN_TMP ]; then
echo "Error: unable to find or create $DARSHAN_TMP" 1>&2
exit 1
fi
if [ ! -w $DARSHAN_TMP ]; then
echo "Error: unable to write to $DARSHAN_TMP" 1>&2
exit 1
fi
echo "---generating ldmsd configuration file---"
cat > stream-samp-latest.conf << EOF
load name=hello_sampler
config name=hello_sampler producer=host1 instance=host1/hello_sampler stream=darshanConnector component_id=1
start name=hello_sampler interval=1000000 offset=0
load name=stream_csv_store
config name=stream_csv_store path=./streams/store container=csv stream=darshanConnector rolltype=3 rollover=500000
EOF
echo "---starting ldmsd---"
cat > ldmsd-latest.sh << EOF
. /opt/ovis-latest/etc/profile.d/set-ovis-variables.sh
ldmsd \$@ &
EOF
chmod 755 ldmsd-latest.sh
./ldmsd-latest.sh -x sock:10444 -c stream-samp-latest.conf -l /tmp/stream-samp-latest.log -v DEBUG
echo "---check daemon is running---"
STREAM_SAMP_LATEST_PID=$(pgrep -f stream-samp-latest.conf)
pgrep -a ldmsd
[[ -n "${STREAM_SAMP_LATEST_PID}" ]] || error "stream-samp-latest.log is not running"
cat > ldms_ls-latest.sh << EOF
. /opt/ovis-latest/etc/profile.d/set-ovis-variables.sh
ldms_ls \$@ &
EOF
chmod 755 ldms_ls-latest.sh
./ldms_ls-latest.sh -p 10444 -x sock -v -v
echo "---Test Case #1: Darshan-LDMS Env Set and Connected to LDMS Streams Deamon---"
mpicc $DARSHAN_TESTDIR/test-cases/src/${PROG}.c -o $DARSHAN_TMP/${PROG}
cd $DARSHAN_TMP
./${PROG} -f $DARSHAN_TMP/${PROG}.tmp.dat 2>> $DARSHAN_TMP/${PROG}.err
echo "---Test Case #2: Darshan-LDMS Environment NOT Set---"
unset DARSHAN_LDMS_STREAM
unset DARSHAN_LDMS_PORT
unset DARSHAN_LDMS_HOST
unset DARSHAN_LDMS_XPRT
unset DARSHAN_LDMS_AUTH
unset DARSHAN_LDMS_ENABLE_MPIIO
unset DARSHAN_LDMS_ENABLE_POSIX
unset DARSHAN_LDMS_ENABLE_STDIO
unset DARSHAN_LDMS_ENABLE_HDF5
export DARSHAN_LOGFILE=$DARSHAN_TMP/${PROG}-no-ldms-env.darshan
./${PROG} -f $DARSHAN_TMP/${PROG}.tmp.dat 2>> $DARSHAN_TMP/${PROG}.err
echo "---Test Case #3: LDMS Streams Daemon NOT Connected---"
export DARSHAN_LDMS_STREAM=darshanConnector
export DARSHAN_LDMS_PORT=10444
export DARSHAN_LDMS_HOST=localhost
export DARSHAN_LDMS_XPRT=sock
export DARSHAN_LDMS_AUTH=none
export DARSHAN_LDMS_ENABLE=
export DARSHAN_LDMS_ENABLE_MPIIO=
export DARSHAN_LDMS_ENABLE_POSIX=
export DARSHAN_LDMS_ENABLE_STDIO=
export DARSHAN_LDMS_ENABLE_HDF5=
export DARSHAN_LOGFILE=$DARSHAN_TMP/${PROG}-no-ldms-daemon.darshan
echo "---killing the daemon---"
kill ${STREAM_SAMP_LATEST_PID}
./${PROG} -f $DARSHAN_TMP/${PROG}.tmp.dat 2>> $DARSHAN_TMP/${PROG}.err
echo "---Parse Darshan log file from darshanConnector Run---"
export DARSHAN_LOGFILE=$DARSHAN_TMP/${PROG}.darshan
if [ ! -x $DARSHAN_INSTALL_PATH/bin/darshan-parser ]; then
echo "Error: $DARSHAN_PATH doesn't contain a valid Darshan install." 1>&2
exit 1
fi
$DARSHAN_INSTALL_PATH/bin/darshan-parser --all $DARSHAN_LOGFILE > $DARSHAN_TMP/${PROG}.darshan.txt
if [ $? -ne 0 ]; then
echo "Error: failed to parse ${DARSHAN_LOGFILE}" 1>&2
exit 1
fi
- name: Check Results
run: |
export DARSHAN_TMP=/tmp/darshan-ldms-test
export PROG=mpi-io-test
echo "---View LDMS Output and Darshan Log Directory---"
ls -ltrch $DARSHAN_TMP
ls -ltrch streams/store/csv
cat $DARSHAN_TMP/${PROG}.err
echo "---Check Darshan Log Files Exist---"
if [[ ! -f "$DARSHAN_TMP/${PROG}.darshan" || ! -f "$DARSHAN_TMP/${PROG}-no-ldms-env.darshan" || ! -f "$DARSHAN_TMP/${PROG}-no-ldms-daemon.darshan" ]]; then
echo "One of the darshan log files do not exist."
exit 1
fi
echo "---Check LDMS Data Collection---"
if ! compgen -G "streams/store/csv/darshanConnector.*" > /dev/null; then
echo "CSV file does not exist."
cat /tmp/stream-samp-latest.log
exit 1
elif [[ -z "$(cat streams/store/csv/darshanConnector.*)" ]]; then
echo "No data was stored to CSV file."
cat /tmp/stream-samp-latest.log
exit 1
fi
echo "DONE!"