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Add Package: bigdft-suite #19683
Add Package: bigdft-suite #19683
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Please refer to the licenses of each individual component: | ||
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licenses/atlab.copying | ||
licenses/bigdft.copying | ||
licenses/chess.copying | ||
licenses/futile.copying | ||
licenses/GaIN.copying | ||
licenses/libabinit.copying | ||
licenses/psolver.copying | ||
licenses/pybigdft.copying | ||
licenses/spred.copying | ||
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source bigdftvars.sh | ||
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# Files | ||
cp $RECIPE_DIR/conda.rc . | ||
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# Build | ||
export JHBUILD_RUN_AS_ROOT="please do it" | ||
mkdir build | ||
cd build | ||
python ../Installer.py -y autogen | ||
python ../Installer.py -y build -f ../conda.rc | ||
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# Activate script | ||
mkdir -p "${PREFIX}/etc/conda/activate.d" | ||
cp "${RECIPE_DIR}/activate.sh" "${PREFIX}/etc/conda/activate.d/${PKG_NAME}_activate.sh" |
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#This is the configuration file for the BigDFT installer | ||
#This is a python script which is executed by the build suite | ||
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#List the module the this rcfile will build | ||
modules = ['bigdft'] | ||
skip = ["spglib", "PyYAML", "libyaml", "ntpoly", "libxc"] | ||
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from os import environ | ||
prefix = environ["PREFIX"] | ||
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def env_configuration(): | ||
''' | ||
Species the configure line for various autotools packages. | ||
''' | ||
from sys import platform | ||
from os import environ | ||
from os.path import join | ||
env = {} | ||
env["FC"] = "mpifort" | ||
env["CC"] = environ["CC_FOR_BUILD"] | ||
env["CXX"] = environ["CXX_FOR_BUILD"] | ||
env["CFLAGS"] = "-O2 -DCONDA " + environ["CFLAGS"] + " -ldl" | ||
env["CPPFLAGS"] = environ["CPPFLAGS"] | ||
env["CPPFLAGS"] += " -I" + join(prefix, "include", "futile") | ||
env["FCFLAGS"] = "-O2 -fopenmp -fallow-argument-mismatch " | ||
env["FCFLAGS"] += environ["FORTRANFLAGS"] + " -ldl" | ||
env["--with-ext-linalg"] = "-llapack -lblas" | ||
env["--with-yaml-path"] = prefix | ||
return " ".join(['"' + x + '=' + y + '"' for x, y in env.items()]) | ||
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#here follow the configuration instructions for the modules built | ||
autogenargs = env_configuration() |
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mpi: | ||
- openmpi | ||
- mpich | ||
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channel_targets: | ||
- conda-forge bigdft_dev | ||
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GNU LESSER GENERAL PUBLIC LICENSE | ||
Version 3, 29 June 2007 | ||
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Copyright (C) 2007 Free Software Foundation, Inc. <https://fsf.org/> | ||
Everyone is permitted to copy and distribute verbatim copies | ||
of this license document, but changing it is not allowed. | ||
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This version of the GNU Lesser General Public License incorporates | ||
the terms and conditions of version 3 of the GNU General Public | ||
License, supplemented by the additional permissions listed below. | ||
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0. Additional Definitions. | ||
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As used herein, "this License" refers to version 3 of the GNU Lesser | ||
General Public License, and the "GNU GPL" refers to version 3 of the GNU | ||
General Public License. | ||
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"The Library" refers to a covered work governed by this License, | ||
other than an Application or a Combined Work as defined below. | ||
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An "Application" is any work that makes use of an interface provided | ||
by the Library, but which is not otherwise based on the Library. | ||
Defining a subclass of a class defined by the Library is deemed a mode | ||
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A "Combined Work" is a work produced by combining or linking an | ||
Application with the Library. The particular version of the Library | ||
with which the Combined Work was made is also called the "Linked | ||
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The "Minimal Corresponding Source" for a Combined Work means the | ||
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1. Exception to Section 3 of the GNU GPL. | ||
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You may convey a covered work under sections 3 and 4 of this License | ||
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2. Conveying Modified Versions. | ||
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If you modify a copy of the Library, and, in your modifications, a | ||
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Ideally, this should be paired with a
deactivate.sh
script that undoes the effect of the activation script, so the env vars set do not permeate into the user session once the env is deactivated.There was a problem hiding this comment.
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Thanks. Do you know of any projects that have well written
deactivate.sh
scripts that unset environment variables? Because it seems like I'd first need to store all of the original environment variable values somewhere (noting that multiple sessions with different initial conditions could be inside the environment at the same time) for restoring. I can write a script to do all this but I'd like to avoid any pitfalls.There was a problem hiding this comment.
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You can search Github for projects in the conda-forge organization which use a
deactivate.sh
script https://github.com/search?q=org%3Aconda-forge+deactivate.sh&type=codeThere was a problem hiding this comment.
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This is a good example. The idea is to backup potential values that were set for that env var before you activate. Then on deactivation, restore to the backup or, if empty, unset.
You will need to take notes of what the
source
d script is doing, though :)There was a problem hiding this comment.
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Thank you for the suggestions! Storing in environment variables with the
conda
suffix seems like a good strategy. I've implemented a deactivate script based on this.