Update galaxy-tool-util requirement from <23,>=22.1.2 to >=22.1.2,<24 #1825
Workflow file for this run
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| name: CI Tests | |
| on: | |
| push: | |
| branches: [ main ] | |
| pull_request: | |
| branches: [ main ] | |
| workflow_dispatch: | |
| concurrency: | |
| group: build-${{ github.event.pull_request.number || github.ref }} | |
| cancel-in-progress: true | |
| env: | |
| TOX_SKIP_MISSING_INTERPRETERS: False | |
| # Rich (pip) | |
| FORCE_COLOR: 1 | |
| # Tox | |
| PY_COLORS: 1 | |
| # Mypy (see https://github.com/python/mypy/issues/7771) | |
| TERM: xterm-color | |
| MYPY_FORCE_COLOR: 1 | |
| MYPY_FORCE_TERMINAL_WIDTH: 200 | |
| # Pytest | |
| PYTEST_ADDOPTS: --color=yes | |
| jobs: | |
| tox: | |
| name: Tox | |
| runs-on: ubuntu-22.04 | |
| strategy: | |
| matrix: | |
| py-ver-major: [3] | |
| py-ver-minor: [8, 9, 10, 11, 12] | |
| step: [unit] | |
| env: | |
| py-semver: ${{ format('{0}.{1}', matrix.py-ver-major, matrix.py-ver-minor) }} | |
| TOXENV: ${{ format('py{0}{1}-{2}', matrix.py-ver-major, matrix.py-ver-minor, matrix.step) }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Singularity | |
| if: ${{ matrix.step == 'unit' || matrix.step == 'mypy' }} | |
| run: | | |
| wget --no-verbose https://github.com/sylabs/singularity/releases/download/v3.10.4/singularity-ce_3.10.4-focal_amd64.deb | |
| sudo apt-get install -y ./singularity-ce_3.10.4-focal_amd64.deb | |
| - name: Give the test runner user a name to make provenance happy. | |
| if: ${{ matrix.step == 'unit' || matrix.step == 'mypy' }} | |
| run: sudo usermod -c 'CI Runner' "$(whoami)" | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ env.py-semver }} | |
| allow-prereleases: true | |
| cache: pip | |
| cache-dependency-path: | | |
| requirements.txt | |
| tox.ini | |
| - name: Upgrade setuptools and install tox | |
| run: | | |
| pip install -U pip setuptools wheel | |
| pip install "tox<4" "tox-gh-actions<3" | |
| - name: MyPy cache | |
| if: ${{ matrix.step == 'mypy' }} | |
| uses: actions/cache@v3 | |
| with: | |
| path: .mypy_cache/${{ env.py-semver }} | |
| key: mypy-${{ env.py-semver }} | |
| - name: Test with tox | |
| run: tox -- -n 0 -k test_bioconda -vvv -s | |
| - name: Upload coverage to Codecov | |
| if: ${{ matrix.step == 'unit' }} | |
| uses: codecov/codecov-action@v3 | |
| with: | |
| fail_ci_if_error: false | |
| token: ${{ secrets.CODECOV_TOKEN }} | |