Merge branch 'main' into compatibility-with-prototype

clEsperanto · Sep 29, 2024 · cbbba62 · cbbba62
2 parents 295448a + 5e35602
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diff --git a/demos/interoperability/biabob-example.ipynb b/demos/interoperability/biabob-example.ipynb
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+{
+ "cells": [
+  {
+   "cell_type": "markdown",
+   "id": "6202a27d-1ca0-4261-b010-2eb8681b6f2f",
+   "metadata": {},
+   "source": [
+    "# AI-based code suggestions: bia-bob\n",
+    "\n",
+    "The [bia-bob project](https://github.com/haesleinhuepf/bia-bob) allows to use large language models for generating code in Jupyter notebooks. bia-bob is aware of pyclesperanto and can guide you how to use it. Just write your prompt below \"%%bob\", e.g. mentioning that you want to use GPU-acceleration for image processing and it may suggest using pyclesperanto."
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 1,
+   "id": "583c4b86-d763-4a56-84c0-3108fc7a9c86",
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "import bia_bob"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 2,
+   "id": "84948b45-2f81-46c5-9038-885ddc53a24d",
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "import numpy as np\n",
+    "image = np.random.random((20,20))"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 3,
+   "id": "60b42d69-dc92-41db-89ab-c93f0ec234f1",
+   "metadata": {},
+   "outputs": [
+    {
+     "data": {
+      "text/html": [
+       "\n",
+       "            <div style=\"font-size:7pt\">\n",
+       "            This notebook may contain text, code and images generated by artificial intelligence.\n",
+       "            Used model: gpt-4o-2024-08-06, vision model: gpt-4o-2024-08-06, endpoint: None, bia-bob version: 0.23.1.. Do not enter sensitive or private information and verify generated contents according to good scientific practice. Read more: <a href=\"https://github.com/haesleinhuepf/bia-bob#disclaimer\">https://github.com/haesleinhuepf/bia-bob#disclaimer</a>\n",
+       "            </div>\n",
+       "            "
+      ],
+      "text/plain": [
+       "<IPython.core.display.HTML object>"
+      ]
+     },
+     "metadata": {},
+     "output_type": "display_data"
+    }
+   ],
+   "source": [
+    "%%bob \n",
+    "Apply a GPU-accelerated Gaussian blur to the `image` and show the result"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "id": "7201b7b3-0981-41b3-af9d-ffe5bf6c8fe9",
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "import pyclesperanto as cle\n",
+    "import stackview\n",
+    "\n",
+    "# Apply Gaussian blur\n",
+    "blurred_image = cle.gaussian_blur(image, sigma_x=2, sigma_y=2, sigma_z=0)\n",
+    "\n",
+    "# Show the result\n",
+    "stackview.insight(blurred_image)"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "id": "5786dfe9-c944-4b3b-86c4-65b95e778fcb",
+   "metadata": {},
+   "outputs": [],
+   "source": []
+  }
+ ],
+ "metadata": {
+  "kernelspec": {
+   "display_name": "Python 3 (ipykernel)",
+   "language": "python",
+   "name": "python3"
+  },
+  "language_info": {
+   "codemirror_mode": {
+    "name": "ipython",
+    "version": 3
+   },
+   "file_extension": ".py",
+   "mimetype": "text/x-python",
+   "name": "python",
+   "nbconvert_exporter": "python",
+   "pygments_lexer": "ipython3",
+   "version": "3.11.9"
+  }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 5
+}