Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Add a number of fixes to the IOS data parser #84

Open
wants to merge 31 commits into
base: development
Choose a base branch
from
Open

Add a number of fixes to the IOS data parser #84

wants to merge 31 commits into from

Commits on Apr 29, 2024

  1. fix latitude longitude encoding to float32

    @JessyBarrette
    JessyBarrette committed Apr 29, 2024
    Configuration menu
    Copy the full SHA
    a48ca61 View commit details
    Browse the repository at this point in the history

  2. add time variable attributes

    @JessyBarrette
    JessyBarrette committed Apr 29, 2024
    Configuration menu
    Copy the full SHA
    a321ed7 View commit details
    Browse the repository at this point in the history

  3. add 2023-003-0003.ctd test file

    @JessyBarrette
    JessyBarrette committed Apr 29, 2024
    Configuration menu
    Copy the full SHA
    1948255 View commit details
    Browse the repository at this point in the history

Commits on Apr 30, 2024

  1. make explicit variable selection

    @JessyBarrette
    JessyBarrette committed Apr 30, 2024
    Configuration menu
    Copy the full SHA
    b720753 View commit details
    Browse the repository at this point in the history

  2. output pandas timestamp foand make missing time error level

    @JessyBarrette
    JessyBarrette committed Apr 30, 2024
    Configuration menu
    Copy the full SHA
    0b241c1 View commit details
    Browse the repository at this point in the history

  3. handle cases where encoding is defined by parser already

    @JessyBarrette
    JessyBarrette committed Apr 30, 2024
    Configuration menu
    Copy the full SHA
    b565551 View commit details
    Browse the repository at this point in the history

  4. add ctd pressure variable vocabulary

    @JessyBarrette
    JessyBarrette committed Apr 30, 2024
    Configuration menu
    Copy the full SHA
    8976c0e View commit details
    Browse the repository at this point in the history

  5. fix ios file encoding

    @JessyBarrette
    JessyBarrette committed Apr 30, 2024
    Configuration menu
    Copy the full SHA
    8ba5636 View commit details
    Browse the repository at this point in the history

  6. fix ios vocabulary load

    @JessyBarrette
    JessyBarrette committed Apr 30, 2024
    Configuration menu
    Copy the full SHA
    5ac6b98 View commit details
    Browse the repository at this point in the history

  7. refactor vocabulary handling and add test to make sure apply_func var… 

    …iables are depriotorized
    @JessyBarrette
    JessyBarrette committed Apr 30, 2024
    Configuration menu
    Copy the full SHA
    796340a View commit details
    Browse the repository at this point in the history

  8. add a test to make sure pressure gets converted when no depth exists

    @JessyBarrette
    JessyBarrette committed Apr 30, 2024
    Configuration menu
    Copy the full SHA
    351315e View commit details
    Browse the repository at this point in the history

  9. isort black

    @JessyBarrette
    JessyBarrette committed Apr 30, 2024
    Configuration menu
    Copy the full SHA
    c4191e0 View commit details
    Browse the repository at this point in the history

  10. fix some parsing issues

    @JessyBarrette
    JessyBarrette committed Apr 30, 2024
    Configuration menu
    Copy the full SHA
    dbdcdd6 View commit details
    Browse the repository at this point in the history

Commits on May 1, 2024

  1. add common attributes to flag variables

    @JessyBarrette
    JessyBarrette committed May 1, 2024
    Configuration menu
    Copy the full SHA
    832d86f View commit details
    Browse the repository at this point in the history

  2. lower log level of bad character

    @JessyBarrette
    JessyBarrette committed May 1, 2024
    Configuration menu
    Copy the full SHA
    ce80138 View commit details
    Browse the repository at this point in the history

  3. refactor a bit vocabulary mapping

    @JessyBarrette
    JessyBarrette committed May 1, 2024
    Configuration menu
    Copy the full SHA
    b29136d View commit details
    Browse the repository at this point in the history

  4. update vocabulary ios_name on duplicated variables

    @JessyBarrette
    JessyBarrette committed May 1, 2024
    Configuration menu
    Copy the full SHA
    ee6eb08 View commit details
    Browse the repository at this point in the history

  5. ignore date time variabes in vocabulary mapping

    @JessyBarrette
    JessyBarrette committed May 1, 2024
    Configuration menu
    Copy the full SHA
    88ba289 View commit details
    Browse the repository at this point in the history

  6. add a comment column to ios vocabulary and dissolved:oxygen winkler term

    @JessyBarrette
    JessyBarrette committed May 1, 2024
    Configuration menu
    Copy the full SHA
    8069f80 View commit details
    Browse the repository at this point in the history

  7. fill rename column in ios vocabulary by ios_name if no defined

    @JessyBarrette
    JessyBarrette committed May 1, 2024
    Configuration menu
    Copy the full SHA
    ec464d2 View commit details
    Browse the repository at this point in the history

  8. drop fillna in main parser

    @JessyBarrette
    JessyBarrette committed May 1, 2024
    Configuration menu
    Copy the full SHA
    31ca8a4 View commit details
    Browse the repository at this point in the history

  9. add placeholder for chlorophyll variables

    @JessyBarrette
    JessyBarrette committed May 1, 2024
    Configuration menu
    Copy the full SHA
    e797adf View commit details
    Browse the repository at this point in the history

  10. ignore start times

    @JessyBarrette
    JessyBarrette committed May 1, 2024
    Configuration menu
    Copy the full SHA
    542b6ef View commit details
    Browse the repository at this point in the history

  11. add a vocabulary to convert kpascal pressure to dbar

    @JessyBarrette
    JessyBarrette committed May 1, 2024
    Configuration menu
    Copy the full SHA
    40a5b99 View commit details
    Browse the repository at this point in the history

  12. lower missing format to info level

    @JessyBarrette
    JessyBarrette committed May 1, 2024
    Configuration menu
    Copy the full SHA
    3f8cdf8 View commit details
    Browse the repository at this point in the history

  13. add RAW section parser

    @JessyBarrette
    JessyBarrette committed May 1, 2024
    Configuration menu
    Copy the full SHA
    34700e7 View commit details
    Browse the repository at this point in the history

  14. add more default variable mappings

    @JessyBarrette
    JessyBarrette committed May 1, 2024
    Configuration menu
    Copy the full SHA
    90cb05b View commit details
    Browse the repository at this point in the history

  15. add a CTD test variable

    @JessyBarrette
    JessyBarrette committed May 1, 2024
    Configuration menu
    Copy the full SHA
    226a851 View commit details
    Browse the repository at this point in the history

  16. Merge remote-tracking branch 'origin/development' into fix-74-dfo-ios… 

    …-update
    @JessyBarrette
    JessyBarrette committed May 1, 2024
    Configuration menu
    Copy the full SHA
    3330a5b View commit details
    Browse the repository at this point in the history

  17. add absolute:salinity to ios vocablary #82

    @JessyBarrette
    JessyBarrette committed May 1, 2024
    Configuration menu
    Copy the full SHA
    5803408 View commit details
    Browse the repository at this point in the history

  18. isort black formatting

    @JessyBarrette
    JessyBarrette committed May 1, 2024
    Configuration menu
    Copy the full SHA
    a1a27b4 View commit details
    Browse the repository at this point in the history