Major change to the S3 object definition #147
Annotations
8 errors and 3 warnings
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Run r-lib/actions/check-r-package@v2
--- re-building ‘a1_pcawg_priors.Rmd’ using rmarkdown
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Run r-lib/actions/check-r-package@v2
processing vignette 'a2_classify_mutations.Rmd' failed with diagnostics:
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Run r-lib/actions/check-r-package@v2
processing vignette 'a3_genome_interpreter.Rmd' failed with diagnostics:
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Run r-lib/actions/check-r-package@v2
processing vignette 'a4_survival_analysis.Rmd' failed with diagnostics:
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Run r-lib/actions/check-r-package@v2
processing vignette 'a5_metastasis_analysis.Rmd' failed with diagnostics:
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Run r-lib/actions/check-r-package@v2
Vignette re-building failed.
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Run r-lib/actions/check-r-package@v2
Build process failed
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Run r-lib/actions/check-r-package@v2
Process completed with exit code 1.
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Run r-lib/actions/check-r-package@v2
No files were found with the provided path: /Users/runner/work/INCOMMON/INCOMMON/check. No artifacts will be uploaded.
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Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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