RAM & Local disk updated for sufficient memory

broadinstitute · Dec 21, 2022 · 7b809b0 · 7b809b0
1 parent ad1b21d
commit 7b809b0
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/pipes/WDL/tasks/tasks_16S_amplicon.wdl b/pipes/WDL/tasks/tasks_16S_amplicon.wdl
@@ -260,9 +260,9 @@ task tax_analysis {
         File    representative_seqs_qza
         File    representative_table_qza 
         String  basename  =   basename(trained_classifier, '.qza')
-        Int     memory_mb = 2000
+        Int     memory_mb = 5
         Int     cpu = 1
-        Int     disk_size_gb = ceil(2*size(trained_classifier, "GiB")) + 5
+        Int     disk_size_gb = 375
         String  docker = "quay.io/broadinstitute/qiime2:conda"
     }
     command <<<
@@ -287,7 +287,7 @@ task tax_analysis {
 }
     runtime {
         docker: docker
-        memory: "${memory_mb} MiB"
+        memory: "7 GB"
         cpu: cpu
         disk: disk_size_gb + " GB"
         disks: "local-disk " + disk_size_gb + " HDD"