Skip to content

Actions: broadinstitute/viral-pipelines

Actions

All workflows

Actions

Loading...
Loading

Showing runs from all workflows
1,367 workflow runs
1,367 workflow runs

Filter by Event

Filter by Status

Filter by Branch

Filter by Actor

workflow added, added bam to fastq conversion in tools.wdl viral-pipelines CI #1666: Commit 39e8b72 pushed by golu099
November 16, 2023 19:27 2m 4s fn_lydia_megablast
fn_lydia_megablast
November 16, 2023 19:27 2m 4s
bump viral-core to 2.2.4 (with firecloud py lib) for create_or_update… viral-pipelines CI #1665: Commit 050abac pushed by tomkinsc
November 16, 2023 07:15 11m 12s ct-setup-sample-tables
ct-setup-sample-tables
November 16, 2023 07:15 11m 12s
output cleaned_bam_uris directly viral-pipelines CI #1664: Commit dad1dd0 pushed by tomkinsc
November 15, 2023 17:53 11m 33s ct-setup-sample-tables
ct-setup-sample-tables
November 15, 2023 17:53 11m 33s
missing bracket viral-pipelines CI #1663: Commit 5426f86 pushed by golu099
November 9, 2023 01:51 35m 7s fn_lydia_megablast
fn_lydia_megablast
November 9, 2023 01:51 35m 7s
updated taxonomy db input viral-pipelines CI #1662: Commit 125c51e pushed by golu099
November 9, 2023 01:42 36m 58s fn_lydia_megablast
fn_lydia_megablast
November 9, 2023 01:42 36m 58s
directly request workspace name and namespace from API viral-pipelines CI #1661: Commit 7264289 pushed by dpark01
November 8, 2023 19:23 13m 35s dp-bugfix-example
dp-bugfix-example
November 8, 2023 19:23 13m 35s
Update demux_deplete_and_table_insert.wdl viral-pipelines CI #1660: Commit 0b58e44 pushed by tomkinsc
November 7, 2023 00:12 20m 32s ct-setup-sample-tables
ct-setup-sample-tables
November 7, 2023 00:12 20m 32s
make library and sample table creation conditional on execution on Terra viral-pipelines CI #1659: Commit 6e65471 pushed by tomkinsc
November 4, 2023 01:23 15m 8s ct-setup-sample-tables
ct-setup-sample-tables
November 4, 2023 01:23 15m 8s
pass (optoinal) sample_rename_map input directly viral-pipelines CI #1658: Commit 5667289 pushed by tomkinsc
November 4, 2023 01:18 17m 6s ct-setup-sample-tables
ct-setup-sample-tables
November 4, 2023 01:18 17m 6s
remove cruft viral-pipelines CI #1657: Commit 5b5932e pushed by tomkinsc
November 4, 2023 00:40 16m 25s ct-setup-sample-tables
ct-setup-sample-tables
November 4, 2023 00:40 16m 25s
add outputs to demux_deplete_and_table_insert viral-pipelines CI #1656: Commit d2ce8fd pushed by tomkinsc
November 4, 2023 00:36 16m 35s ct-setup-sample-tables
ct-setup-sample-tables
November 4, 2023 00:36 16m 35s
directly use demux_deplete.run_id as input to table creation task viral-pipelines CI #1655: Commit 5315f0b pushed by tomkinsc
November 4, 2023 00:28 13m 37s ct-setup-sample-tables
ct-setup-sample-tables
November 4, 2023 00:28 13m 37s
add demux_deplete_and_table_insert to dockstore manifest viral-pipelines CI #1654: Commit dfe5381 pushed by tomkinsc
November 4, 2023 00:24 14m 12s ct-setup-sample-tables
ct-setup-sample-tables
November 4, 2023 00:24 14m 12s
WIP add create_or_update_sample_tables task based on prior jupyter no… viral-pipelines CI #1653: Commit 5dc893b pushed by tomkinsc
November 4, 2023 00:21 16m 56s ct-setup-sample-tables
ct-setup-sample-tables
November 4, 2023 00:21 16m 56s
Revert "add get_gcloud_env_info task for env config inspection" viral-pipelines CI #1652: Commit 33f87d3 pushed by tomkinsc
November 3, 2023 23:34 17m 15s revert-497-ct-terra-backend-env-exploration
revert-497-ct-terra-backend-env-exploration
November 3, 2023 23:34 17m 15s
directly request workspace name and namespace from API viral-pipelines CI #1651: Commit 7264289 pushed by tomkinsc
November 3, 2023 23:34 18m 23s master
master
November 3, 2023 23:34 18m 23s
add check_terra_env task viral-pipelines CI #1650: Pull request #497 synchronize by tomkinsc
November 3, 2023 21:34 14m 28s ct-terra-backend-env-exploration
ct-terra-backend-env-exploration
November 3, 2023 21:34 14m 28s
Merge branch 'master' into ct-terra-backend-env-exploration viral-pipelines CI #1649: Commit 6062ea5 pushed by tomkinsc
November 3, 2023 21:34 19m 14s ct-terra-backend-env-exploration
ct-terra-backend-env-exploration
November 3, 2023 21:34 19m 14s
add check_terra_env task viral-pipelines CI #1648: Pull request #497 opened by tomkinsc
November 3, 2023 21:34 13m 38s ct-terra-backend-env-exploration
ct-terra-backend-env-exploration
November 3, 2023 21:34 13m 38s
directly request workspace name and namespace from API viral-pipelines CI #1647: Commit ee7d99f pushed by tomkinsc
November 3, 2023 20:53 15m 15s ct-terra-backend-env-exploration
ct-terra-backend-env-exploration
November 3, 2023 20:53 15m 15s
Merge branch 'master' into ct-demux-deplete-merge-lanes viral-pipelines CI #1646: Commit 45cec20 pushed by tomkinsc
November 3, 2023 17:40 17m 44s ct-demux-deplete-merge-lanes
ct-demux-deplete-merge-lanes
November 3, 2023 17:40 17m 44s
merge samples across lanes in demux deplete viral-pipelines CI #1645: Pull request #369 synchronize by tomkinsc
November 3, 2023 17:40 15m 18s ct-demux-deplete-merge-lanes
ct-demux-deplete-merge-lanes
November 3, 2023 17:40 15m 18s
in check_terra_env task, output top-level submission ID, and workspac… viral-pipelines CI #1644: Commit 79b3951 pushed by tomkinsc
November 3, 2023 17:14 15m 22s ct-terra-backend-env-exploration
ct-terra-backend-env-exploration
November 3, 2023 17:14 15m 22s
Adding task file for lydia's megablast tool viral-pipelines CI #1643: Commit a0a5f9d pushed by golu099
November 2, 2023 19:46 20m 46s fn_lydia_megablast
fn_lydia_megablast
November 2, 2023 19:46 20m 46s
handle non-table input, and single-row table input in check_terra_env viral-pipelines CI #1642: Commit 4b0b560 pushed by tomkinsc
November 1, 2023 17:24 16m 9s ct-terra-backend-env-exploration
ct-terra-backend-env-exploration
November 1, 2023 17:24 16m 9s
ProTip! You can narrow down the results and go further in time using created:<2023-11-01 or the other filters available.