Add test data to test transformation

brainglobe · Jun 29, 2022 · a6f8869 · a6f8869
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diff --git a/MANIFEST.in b/MANIFEST.in
@@ -9,3 +9,4 @@ recursive-include cellfinder_napari *.png
 recursive-exclude * __pycache__
 recursive-exclude * *.py[co]
 recursive-exclude examples *
+recursive-exclude cellfinder_napari/tests/data *
diff --git a/cellfinder_napari/tests/data/brainreg-napari-output/boundaries.tiff b/cellfinder_napari/tests/data/brainreg-napari-output/boundaries.tiff
diff --git a/cellfinder_napari/tests/data/brainreg-napari-output/brainreg.json b/cellfinder_napari/tests/data/brainreg-napari-output/brainreg.json
@@ -0,0 +1 @@
+{"image_paths": null, "backend": "niftyreg", "voxel_sizes": ["50.0", "40.0", "40.0"], "orientation": "psl", "data_orientation": "psl", "atlas": "example_mouse_100um", "atlas_key": "atlas_key.example_mouse_100um", "registration_output_folder": "/Users/dstansby/brainreg-napari-output", "affine_n_steps": "6", "affine_use_n_steps": "5", "freeform_n_steps": "6", "freeform_use_n_steps": "4", "bending_energy_weight": "0.95", "grid_spacing": "10", "smoothing_sigma_reference": "1", "smoothing_sigma_floating": "1.0", "histogram_n_bins_floating": "128.0", "histogram_n_bins_reference": "128.0"}
Original file line number	Diff line number	Diff line change
		@@ -0,0 +1 @@
		{"image_paths": null, "backend": "niftyreg", "voxel_sizes": ["50.0", "40.0", "40.0"], "orientation": "psl", "data_orientation": "psl", "atlas": "example_mouse_100um", "atlas_key": "atlas_key.example_mouse_100um", "registration_output_folder": "/Users/dstansby/brainreg-napari-output", "affine_n_steps": "6", "affine_use_n_steps": "5", "freeform_n_steps": "6", "freeform_use_n_steps": "4", "bending_energy_weight": "0.95", "grid_spacing": "10", "smoothing_sigma_reference": "1", "smoothing_sigma_floating": "1.0", "histogram_n_bins_floating": "128.0", "histogram_n_bins_reference": "128.0"}