Skip to content

Releases: biodiversitydata-se/coidb

Version 0.3.2

14 Dec 10:20
2c394bc
Compare
Choose a tag to compare

Changelog

  • Properly update sequences after trimming gaps and terminal N

Version 0.3.1

08 Dec 19:59
19d7fa8
Compare
Choose a tag to compare

Changelog

  • Translate characters to uppercase when filtering non-standard nucleotides

Version 0.3.0

07 Dec 20:15
956a865
Compare
Choose a tag to compare

Changelog:

  • Include filtering of sequences with non-standard nucleotides.
  • Split download and extraction steps

Version 0.2.4

15 Oct 05:39
57af3f7
Compare
Choose a tag to compare

Changelog:

  • Sort sequences by BOLD cluster id when clustering

Version 0.2.3

09 Oct 21:44
f3eae98
Compare
Choose a tag to compare
Merge pull request #4 from johnne/devel

Devel

Version 0.2.1

06 Oct 07:40
5078ae1
Compare
Choose a tag to compare

Changelog:

  • Update string splitting when extracting species names for BOLD bins

Version 0.2

21 Jul 04:18
Compare
Choose a tag to compare

Changelog

  • Downloads an additional file from GBIF (ibol_bins_2021_02_08.zip) for mapping BOLD bin ids to species name

Minor fixes

  • Remove --show-failed-logs from snakemake call

First pre-release

06 May 07:25
Compare
Choose a tag to compare
First pre-release Pre-release
Pre-release

Working release pending more extensive testing