medaka: add linux-aarch64 build

recipes/medaka/build.sh

@@ -1,10 +1,10 @@
-#!/bin/bash
+#!/bin/bash -euo
 
 export INCLUDE_PATH="${PREFIX}/include"
 export LIBRARY_PATH="${PREFIX}/lib"
 export LDFLAGS="${LDFLAGS} -L${PREFIX}/lib"
 
-export CFLAGS="-I${PREFIX}/include ${LDFLAGS}"
+export CFLAGS="${CFLAGS} -O3 -I${PREFIX}/include ${LDFLAGS}"
 
 # disable Makefile driven build of htslib.a
 sed -i.bak "s/'build_ext': HTSBuild//" setup.py
@@ -13,4 +13,6 @@ sed -i.bak "s/'build_ext': HTSBuild//" setup.py
 sed -i.bak 's/extra_objects.*//' build.py
 sed -i.bak 's/^libraries=\[/libraries=\["hts",/' build.py
 
-$PYTHON -m pip install . --no-deps --ignore-installed -vvv
+rm -rf *.bak
+
+${PYTHON} -m pip install . --no-deps --no-build-isolation --no-cache-dir -vvv

recipes/medaka/conda_build_config.yaml

@@ -4,6 +4,6 @@
 # lead solver conflicts in the future. Please review this on future
 # releases, especially if support for TensorFlow 2.11+ is added.
 libcurl:
-  - 7
+  - 8
 openssl:
-  - 1.1.1
+  - 3