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Make extensions identifiers contain . to separate extensions where multiple used #1755

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merged 3 commits into from
Apr 19, 2024

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yarikoptic
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@effigies
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Dots are separators in the schema. This seems like a bad idea.

@effigies
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We could use an underscore instead.

@yarikoptic
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good idea, done, taking out of draft.

@yarikoptic yarikoptic marked this pull request as ready for review April 13, 2024 15:11
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codecov bot commented Apr 13, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 87.92%. Comparing base (bbe2283) to head (95f4833).

Additional details and impacted files
@@           Coverage Diff           @@
##           master    #1755   +/-   ##
=======================================
  Coverage   87.92%   87.92%           
=======================================
  Files          16       16           
  Lines        1375     1375           
=======================================
  Hits         1209     1209           
  Misses        166      166           

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@Remi-Gau Remi-Gau added exclude-from-changelog This item will not feature in the automatically generated changelog schema Issues related to the YAML schema representation of the specification. Patch version release. labels Apr 15, 2024
@effigies
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After #1749, we need to update the anchors in these links:

grep -rI 'tsvgz\|niigz' src/**/*.md
src/common-principles.md:[compressed tab-delineated (TSV.GZ) files](glossary.md#tsvgz-extensions) when
src/modality-specific-files/physiological-recordings.md:([TSV.GZ file](../glossary.md#tsvgz-extensions)) and a corresponding
src/modality-specific-files/task-events.md:([TSV.GZ file](../glossary.md#tsvgz-extensions)) and a corresponding

@yarikoptic
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sorry , I am missing why this PR is "relevant" or why they were not spotted/adjusted in #1749 - don't linkchecker tests those as well?

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effigies commented Apr 19, 2024

I don't think anchors fail to resolve. And #1749 introduced links to these glossary terms that were not there before. This PR changes the target of those links, so needs to also change the links.

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "sed -i'' -e 's/tsvgz/tsv_gz/g' src/*.md src/*/*.md",
 "exit": 0,
 "extra_inputs": [],
 "inputs": [],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
@yarikoptic
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yarikoptic commented Apr 19, 2024

I don't think anchors fail to resolve.

at least in the past I made sure they did... may be when we reverted to use upstream version of linkchecker we lost that... might want to make sure some time so we do not breed them I might have just misread what you meant... let's move on -- thanks for tuning it up!

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Impact on rendered doc is essentially nil. Invoking admin privileges.

@effigies effigies merged commit 1afbfe8 into bids-standard:master Apr 19, 2024
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3 participants