Merge pull request #90 from awslabs/sjg/parmesh-bug-fixes

Parallel mesh bug fixes
awslabs · Aug 30, 2023 · 27217de · 27217de
2 parents 45c384e + 0731614
commit 27217de
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Showing 33 changed files with 44,406 additions and 36,395 deletions.
diff --git a/cmake/ExternalGitTags.cmake b/cmake/ExternalGitTags.cmake
@@ -132,7 +132,7 @@ set(EXTERN_MFEM_GIT_BRANCH
   "Git branch for external MFEM build"
 )
 set(EXTERN_MFEM_GIT_TAG
-  "f2f79aad84a47019fc10e7e8dbddd43d22c25b9c" CACHE STRING  # master @ 08/06/2023
+  "1ccb31fde641a96c9fd2920bc123c35eee31d476" CACHE STRING  # master @ 08/27/2023
   "Git tag for external MFEM build"
 )
 
@@ -146,7 +146,7 @@ set(EXTERN_MUMPS_GIT_BRANCH
   "Git branch for external MUMPS build"
 )
 set(EXTERN_MUMPS_GIT_TAG
-  "11e55c28cbb9279ec2e37e81ecc25a0297e78790" CACHE STRING  # 08/22/2023
+  "e7d12e84c35706433331c058c4bf00186d6b852d" CACHE STRING  # 08/23/2023
   "Git tag for external MUMPS build"
 )
 
@@ -174,7 +174,7 @@ set(EXTERN_PETSC_GIT_BRANCH
   "Git branch for external PETSc build"
 )
 set(EXTERN_PETSC_GIT_TAG
-  "cf5559fda63577c063f2295093a6cc1d073921a1" CACHE STRING  # 08/22/2023
+  "01a4aebd931b780f244a87406598026c571af919" CACHE STRING  # 08/27/2023
   "Git tag for external PETSc build"
 )
 
@@ -202,7 +202,7 @@ set(EXTERN_SLEPC_GIT_BRANCH
   "Git branch for external SLEPc build"
 )
 set(EXTERN_SLEPC_GIT_TAG
-  "99de2f78219a1407b15b805118c86f14e6da0a11" CACHE STRING  # 08/17/2023
+  "2f6668495ab0d84da740777486385283a890d952" CACHE STRING  # 08/27/2023
   "Git tag for external SLEPc build"
 )
 
@@ -216,7 +216,7 @@ set(EXTERN_STRUMPACK_GIT_BRANCH
   "Git branch for external STRUMPACK build"
 )
 set(EXTERN_STRUMPACK_GIT_TAG
-  "bdf1fe9d32dfe0b2997c97ea436bf4afc59d77bf" CACHE STRING  # 08/21/2023
+  "59d267964850b3dc3a97b37f2dba9d1b8228100f" CACHE STRING  # 08/25/2023
   "Git tag for external STRUMPACK build"
 )
 
@@ -244,7 +244,7 @@ set(EXTERN_ZFP_GIT_BRANCH
   "Git branch for external ZFP build"
 )
 set(EXTERN_ZFP_GIT_TAG
-  "c1845815ef1068b578b32823fb22310bd0b62b56" CACHE STRING  # 08/06/2023
+  "bc5e24145ea6f168cf5dd672e0f11544013004da" CACHE STRING  # 08/24/2023
   "Git tag for external ZFP build"
 )
 

diff --git a/cmake/ExternalMFEM.cmake b/cmake/ExternalMFEM.cmake
@@ -247,11 +247,18 @@ message(STATUS "MFEM_OPTIONS: ${MFEM_OPTIONS_PRINT}")
 
 # A number of patches to MFEM for our use cases
 set(MFEM_PATCH_FILES
-  "${CMAKE_SOURCE_DIR}/extern/patch/mfem/patch_mesh_part.diff"
-  "${CMAKE_SOURCE_DIR}/extern/patch/mfem/patch_mesh_vis.diff"
-  "${CMAKE_SOURCE_DIR}/extern/patch/mfem/patch_direct_solvers.diff"
-  "${CMAKE_SOURCE_DIR}/extern/patch/mfem/patch_pa_prereq.diff"
-  "${CMAKE_SOURCE_DIR}/extern/patch/mfem/patch_pa_libceed.diff"
+  "${CMAKE_SOURCE_DIR}/extern/patch/mfem/patch_mesh_vis_dev.diff"
+  "${CMAKE_SOURCE_DIR}/extern/patch/mfem/patch_mesh_partitioner_dev.diff"
+  "${CMAKE_SOURCE_DIR}/extern/patch/mfem/patch_par_tet_mesh_fix.diff"
+  "${CMAKE_SOURCE_DIR}/extern/patch/mfem/patch_strumpack_solver_dev.diff"
+  "${CMAKE_SOURCE_DIR}/extern/patch/mfem/patch_fecoll_vdim_fix.diff"
+  "${CMAKE_SOURCE_DIR}/extern/patch/mfem/patch_stateless_doftrans_threadsafe.diff"
+  "${CMAKE_SOURCE_DIR}/extern/patch/mfem/patch_global_variables_threadsafe.diff"
+  "${CMAKE_SOURCE_DIR}/extern/patch/mfem/patch_assembly_cleanup_prereqs.diff"
+  "${CMAKE_SOURCE_DIR}/extern/patch/mfem/patch_legacy_features_cleanup.diff"
+  "${CMAKE_SOURCE_DIR}/extern/patch/mfem/patch_integ_getrule_interface.diff"
+  "${CMAKE_SOURCE_DIR}/extern/patch/mfem/patch_mfem_device_fixes.diff"
+  "${CMAKE_SOURCE_DIR}/extern/patch/mfem/patch_pa_libceed_dev.diff"
 )
 
 include(ExternalProject)

diff --git a/docs/src/examples/rings.md b/docs/src/examples/rings.md
@@ -90,8 +90,8 @@ file. The resulting postprocessed values are written to `postpro/surface-M.csv`:
 
 ```
             i,                M[1] (H),                M[2] (H)
- 1.000000e+00,        +4.257285432e-11,        +1.832374026e-12
- 2.000000e+00,        +1.955250721e-12,        +7.130247545e-10
+ 1.000000e+00,        +4.257285432e-11,        +1.830940539e-12
+ 2.000000e+00,        +1.955250721e-12,        +7.130247701e-10
 ```
 
 The values computed using the flux integral method are in close agreement to those above, as