[Draft] Modify mesh IO to support nonconformal mesh initialization #416
Workflow file for this run
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| name: Build and Test (Linux, Arm64) | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| build-and-test-linux-arm64: | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: # Only a single simple build test for now | |
| - compiler: clang | |
| mpi: mpich | |
| math-libs: openblas | |
| build-shared: static | |
| with-64bit-int: int32 | |
| with-openmp: serial | |
| with-solver: superlu | |
| with-eigensolver: arpack | |
| runs-on: palace_ubuntu-latest_16-core | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: 'recursive' | |
| - name: Hardware setup, build, and test | |
| uses: uraimo/run-on-arch-action@v2 | |
| id: runcmd | |
| with: | |
| arch: aarch64 | |
| distro: ubuntu_latest | |
| env: | | |
| CMAKE_BUILD_TYPE: Release | |
| NUM_PROC_BUILD_MAX: '32' | |
| NUM_PROC_TEST_MAX: '8' | |
| run: | | |
| # Install dependencies | |
| apt-get update -q | |
| apt-get install -y build-essential clang cmake curl gfortran git lld \ | |
| libmpich-dev pkg-config python3 wget | |
| # Install Julia | |
| curl -fsSL https://install.julialang.org | sh -s -- -y | |
| export PATH=~/.juliaup/bin:$PATH | |
| # Install math libraries (OpenBLAS) | |
| if [[ "${{ matrix.math-libs }}" == 'openblas' ]]; then | |
| if [[ "${{ matrix.with-openmp }}" == 'openmp' ]]; then | |
| apt-get install -y libopenblas-openmp-dev | |
| else | |
| apt-get install -y libopenblas-serial-dev | |
| fi | |
| fi | |
| # Install math libraries (Arm Performance Libraries) | |
| if [[ "${{ matrix.math-libs }}" == 'armpl' ]]; then | |
| wget https://developer.arm.com/-/media/Files/downloads/hpc/arm-performance-libraries/22-0-2/Ubuntu20.04/arm-performance-libraries_22.0.2_Ubuntu-20.04_gcc-11.2.tar | |
| tar -xf arm-performance-libraries* && rm -rf arm-performance-libraries*.tar | |
| ./arm-performance-libraries*/arm-performance-libraries*.sh -a -i /opt/arm | |
| export ARMPL_DIR=/opt/arm/armpl_22.0.2_gcc-11.2 | |
| export LD_LIBRARY_PATH="${LD_LIBRARY_PATH:+LD_LIBRARY_PATH:}$ARMPL_DIR/lib" | |
| fi | |
| # Configure environment for build | |
| if [[ "${{ matrix.compiler }}" == 'clang' ]]; then | |
| export CC=clang | |
| export CXX=clang++ | |
| export FC=gfortran-11 | |
| export LDFLAGS='-fuse-ld=lld' | |
| elif [[ "${{ matrix.compiler }}" == 'gcc' ]]; then | |
| export CC=gcc-11 | |
| export CXX=g++-11 | |
| export FC=gfortran-11 | |
| fi | |
| export NUM_PROC_BUILD=$(nproc 2> /dev/null || sysctl -n hw.ncpu) | |
| if [[ "$NUM_PROC_BUILD" -gt "$NUM_PROC_BUILD_MAX" ]]; then | |
| NUM_PROC_BUILD=$NUM_PROC_BUILD_MAX | |
| fi | |
| [[ "${{ matrix.build-shared }}" == 'shared' ]] && BUILD_SHARED='ON' || BUILD_SHARED='OFF' | |
| [[ "${{ matrix.with-64bit-int }}" == 'int64' ]] && WITH_INT64='ON' || WITH_INT64='OFF' | |
| [[ "${{ matrix.with-openmp }}" == 'openmp' ]] && WITH_OPENMP='ON' || WITH_OPENMP='OFF' | |
| [[ "${{ matrix.with-solver }}" == 'superlu' ]] && WITH_SUPERLU='ON' || WITH_SUPERLU='OFF' | |
| [[ "${{ matrix.with-solver }}" == 'strumpack' ]] && WITH_STRUMPACK='ON' || WITH_STRUMPACK='OFF' | |
| [[ "${{ matrix.with-solver }}" == 'mumps' ]] && WITH_MUMPS='ON' || WITH_MUMPS='OFF' | |
| [[ "${{ matrix.with-eigensolver }}" == 'slepc' ]] && WITH_SLEPC='ON' || WITH_SLEPC='OFF' | |
| [[ "${{ matrix.with-eigensolver }}" == 'arpack' ]] && WITH_ARPACK='ON' || WITH_ARPACK='OFF' | |
| # Build and install | |
| mkdir palace-build && cd palace-build | |
| cmake .. \ | |
| -DCMAKE_INSTALL_PREFIX=/opt/palace \ | |
| -DBUILD_SHARED_LIBS=$BUILD_SHARED \ | |
| -DPALACE_WITH_64BIT_INT=$WITH_INT64 \ | |
| -DPALACE_WITH_OPENMP=$WITH_OPENMP \ | |
| -DPALACE_WITH_SUPERLU=$WITH_SUPERLU \ | |
| -DPALACE_WITH_STRUMPACK=$WITH_STRUMPACK \ | |
| -DPALACE_WITH_MUMPS=$WITH_MUMPS \ | |
| -DPALACE_WITH_SLEPC=$WITH_SLEPC \ | |
| -DPALACE_WITH_ARPACK=$WITH_ARPACK | |
| make -j$NUM_PROC_BUILD | |
| cd .. | |
| # XX TODO: Disable tests for now since Julia precompilation fails | |
| # # Configure environment for tests | |
| # export NUM_PROC_TEST=$(nproc 2> /dev/null || sysctl -n hw.ncpu) | |
| # if [[ "$NUM_PROC_TEST" -gt "$NUM_PROC_TEST_MAX" ]]; then | |
| # NUM_PROC_TEST=$NUM_PROC_TEST_MAX | |
| # fi | |
| # export PATH=/opt/palace/bin:$PATH | |
| # # Run tests | |
| # julia --project=test -e 'using Pkg; Pkg.instantiate()' | |
| # julia --project=test --color=yes test/runtests.jl |