Added 18S PR2 links

aomlomics · Nov 15, 2023 · 675d945 · 675d945
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commit 675d945
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diff --git a/reference-dbs/README.md b/reference-dbs/README.md
@@ -4,6 +4,8 @@ The table below lists reference databases (fasta+taxonomy or classifier) used by
 
 Title                                         | Type           | Target                                         | Number of sequences    | URL
 --------------------------------------------- | -------------- | --------------------------------------------- | ---------------------- | -----
+PR2 18S V9 database (dereplicated) | fasta+taxonomy | 18S V9 (protists, some metazoans)    | 19,470  sequences,<br />11,748 taxa                 | [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.10137946.svg)](https://doi.org/10.5281/zenodo.10137946) <br /> Files: pr2_version_5.0.0_SSU_18S-V9_uniq_seqs.qza,<br />pr2_version_5.0.0_SSU_18S-V9_uniq_tax.qza
+PR2 18S V9 database (dereplicated) | classifier | 18S V9 (protists, some metazoans)    | 19,470  sequences,<br />11,748 taxa                 | [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.10137946.svg)](https://doi.org/10.5281/zenodo.10137946) <br /> Files: pr2_v5.0.0_SSU_18S-V9_uniq-classifier.qza 
 SILVA 16S V4-V5 database (dereplicated)    | fasta+taxonomy | 16S V4-V5 (bacteria, archaea)    | 309,567  sequences,<br />46,254 taxa                 | [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.8302188.svg)](https://doi.org/10.5281/zenodo.8302188) <br /> Files: silva-138_1-99-515f_926r-uniq-seqs.qza,<br />silva-138_1-99-515f_926r-uniq-tax.qza
 SILVA 16S V4-V5 classifier: water (saline)<br />(dereplicated)    | weighted naive-bayes classifier  | 16S V4-V5 (bacteria, archaea) from seawater         | 309,567 sequences,<br />46,254 taxa                  |  [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.8302188.svg)](https://doi.org/10.5281/zenodo.8302188) <br /> File: silva-138_1-99-515f_926r-uniq-water-saline-classifier.qza
 SILVA 16S V4-V5 classifier: sediment (saline)<br />(dereplicated) | weighted naive-bayes classifier | 16S V4-V5 (bacteria, archaea) from marine sediments | 309,567 sequences,<br />46,254 taxa             | [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.8302188.svg)](https://doi.org/10.5281/zenodo.8302188) <br /> Files: silva-138_1-99-515f_926r-uniq-sediment-saline-classifier.qza