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feat: add team context to next (#2922) #2924

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1 change: 1 addition & 0 deletions next/docs/common/entities.ts
Original file line number Diff line number Diff line change
Expand Up @@ -16,6 +16,7 @@ export interface NavigationEntry {
export enum NavigationKey {
CONSORTIA = "consortia",
OVERVIEW = "overview",
TEAM = "team",
}

export interface NavigationNode {
Expand Down
106 changes: 106 additions & 0 deletions next/docs/team.mdx
Original file line number Diff line number Diff line change
@@ -0,0 +1,106 @@
---
author: "AnVIL"
description: "AnVIL is a collaboration between the Broad, JHU, UChicago, RPCI, UCSC, Penn State, WUSTL, OHSU, Harvard Medical School, Vanderbilt & CUNY."
hidden: true
title: "Team"
---

# Leadership Team

<hero>
AnVIL is a collaborative project between the Broad Institute, Johns Hopkins
University, the University of Chicago, Roswell Park Cancer Institute,
University of California at Santa Cruz, Penn State University, Washington
University, Oregon Health and Sciences University, Harvard Medical School,
Vanderbilt University, and City University of New York.
</hero>

Members of these teams are also involved with platform and software development representing the Terra, Galaxy, Bioconductor, Gen3, and Dockstore teams.

## American Heart Association

- [Jennifer Hall](https://www.heart.org/en/about-us/jennifer-hall)

## Brigham and Women's Hostipal

- Matthew Lebo
- Cheryl Clark

## Broad Institute

- [Anthony Philippakis](https://www.broadinstitute.org/bios/anthony-philippakis-0)
- [Clare Bernard](https://www.broadinstitute.org/bios/clare-bernard)
- Rachel Liao
- Jonathan Lawson

## Carnegie Institution for Science

- [Frederick Tan](https://bse.carnegiescience.edu/)

## City University of New York

- [Levi Waldron](https://waldronlab.io/)

## Fred Hutchinson Cancer Research Center

- [Jeffrey Leek](https://jtleek.com/)
- [Ava Hoffman](https://www.avahoffman.com/)

## Harvard University

- [Vince Carey](https://vjcitn.github.io/)

## Johns Hopkins University

- [Michael Schatz](https://schatz-lab.org/)
- Enis Afgan
- [Kasper Hansen](https://publichealth.jhu.edu/faculty/2742/kasper-daniel-hansen)
- [Casey Overby Taylor](https://www.hopkinsmedicine.org/profiles/details/casey-taylor)

## Oregon Health & Sciences University

- [Kyle Ellrott](https://www.ohsu.edu/people/kyle-ellrott-phd)

## Massachusetts General Hospital

- Jeffrey Klann
- Shawn Murphy
- Heidi Rehm
- Victor Castro
- Samuel Aronson

## Moffitt Cancer Center

- [Jeremy Goecks](https://www.goeckslab.org/)

## Penn State University

- [Anton Nekrutenko](https://nekrut.github.io/lab_site/)

## University of California, Santa Cruz

- [Benedict Paten](https://cglgenomics.ucsc.edu/team/)

## University of Chicago

- [Robert Grossman](https://rgrossman.com/)

## Vanderbilt University Medical Center

- [Robert Carroll](https://www.vumc.org/dbmi/person/robert-carroll-phd)
- Alexander Bick
- Peter Embi
- Josh Peterson
- Jodell Jackson

## Washington University

- [Ting Wang](https://genome.wustl.edu/people/ting-wang/)

## National Human Genome Research Institute

- [Valentina Di Francesco](https://www.genome.gov/staff/Valentina-Di-Francesco-MS)
- [Chris Wellington](https://www.genome.gov/staff/Chris-Wellington-BS)
- [Shurjo Sen](https://www.genome.gov/staff/Shurjo-K-Sen-PhD)
- [Elena Ghanaim](https://www.genome.gov/staff/Elena-Ghanaim-MA)
- [Robb Rowley](https://www.genome.gov/staff/robb-rowley-md)
9 changes: 9 additions & 0 deletions next/docs/team/oversight-committee.mdx
Original file line number Diff line number Diff line change
@@ -0,0 +1,9 @@
---
description: "NHGRI supports AnVIL through cooperative agreement awards to the Broad Institute and Johns Hopkins University."
hidden: true
title: "Oversight Committee"
---

# Oversight Committee

An [External Consultant Committee (ECC)](https://www.genome.gov/Funded-Programs-Projects/Computational-Genomics-and-Data-Science-Program/Genomic-Analysis-Visualization-Informatics-Lab-space-AnVIL#externalconsultantcommittee), comprised of a multidisciplinary group of experts, is providing feedback to NHGRI regarding how AnVIL should address the needs of the genomics community.
84 changes: 84 additions & 0 deletions next/docs/team/working-groups.mdx
Original file line number Diff line number Diff line change
@@ -0,0 +1,84 @@
---
author: "AnVIL"
description: "AnVIL's working groups take on the responsibility for specific portions of the project and its day-to-day operations."
hidden: true
title: "Working Groups"
---

# Working Groups

<hero>
AnVIL's working groups take on the responsibility for specific portions of the
project and its day-to-day operations.
</hero>

Working groups are dynamic and are formulated as needed in the course of the project.

## Data Submission and Ingestion Working Group

The Data Submission and Ingestion Working Group defines and monitors the technical and operational processes associated with the submission, ingestion, and validation of AnVIL data.

- AnVIL Data Ingestion team members (Broad)
- Matt Lewis (Broad) organizer

## Data Access Working Group

The Data Access working group defines the methods used to securely control and grant access to restricted access datasets hosted within AnVIL, including managing automated credential handoff and developing streamlined processes for handling Data Access Requests.

#### Co-Chairs

- Elena Ghanaim (NHGRI)
- Jonathan Lawson (Broad)
- Kate Balaconis (Broad) organizer

## Phenotype Working Group

The Phenotype Working Group ensures that the datasets hosted in AnVIL are incorporated in a manner that facilitates research driven by phenotypic questions.

#### Co-Chairs

- Robert Carroll (VUMC)
- Jeff Klann (MGH)
- Queenie Ho (VUMC) organizer

#### Contact

- Mailing list: [AnVIL-Phenotypes](https://lists.anvilproject.org/lists/anvil-phenotypes.lists.anvilproject.org/) ([[email protected]](mailto:[email protected]))

## Portal Working Group

The portal working group organizes and publishes AnVIL's website.

#### Co-Chairs

- Benedict Paten (UCSC)
- Mike Schatz (JHU)
- Ben Vizzier (UCSC) organizer

## Outreach Working Group

The Outreach working group creates scalable onboarding content, provides training, and offers support solutions for the AnVIL project.

#### Co-Chairs

- Jeffrey T. Leek (Fred Hutch)
- Ava Hoffman (Hutch)
- Frederick Tan (Carnegie)
- Natalie Kucher (JHU) organizer

#### Contact

- Mailing list: [AnVIL-outreach](https://lists.anvilproject.org/lists/anvil-outreach.lists.anvilproject.org/) ([[email protected]](mailto:[email protected]))

## Technical Working Group

AnVIL's technical working group provides direction and recommendations to the developers of the AnVIL project.

#### Co-Chairs

- Mike Schatz (JHU)
- Stephen Mosher (JHU) organizer

#### Contact

- Mailing list: [AnVIL-technical](https://lists.anvilproject.org/lists/anvil-technical.lists.anvilproject.org/) ([[email protected]](mailto:[email protected]))
13 changes: 13 additions & 0 deletions next/site-config/anvil-portal/dev/navigation.ts
Original file line number Diff line number Diff line change
Expand Up @@ -48,4 +48,17 @@ export const navigation: NavigationConfig = {
},
],
},
team: {
nodes: [
{
key: "team",
navigation: [
{ label: "Leadership Team", url: "/team" },
{ label: "Working Groups", url: "/team/working-groups" },
{ label: "Oversight Committee", url: "/team/oversight-committee" },
],
slugs: ["team", "working-groups", "oversight-committee"],
},
],
},
};
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