This repository made for certification course BIOINFORMATICS FOR BIOLOGISTS: ANALYSING AND INTERPRETING GENOMICS DATASETS by WELLCOME CONNECTING SCIENCE.
- Next Generation Sequencing and its significance in genomics,
- the installation of widely-used bioinformatics tools,
- the use of different file formats
- Linux commands for sequence quality control, mapping, and variant calling.
- The analysis was also performed using the workflow management system Nextflow and applied to viralrecon, an existing bioinformatics pipeline.
- Downstream analysis included RStudio data visualization of variants obtained from genomic data sample.