Skip to content

Commit

Permalink
first commit
Browse files Browse the repository at this point in the history
  • Loading branch information
alefisico committed Jan 22, 2024
1 parent f13028c commit 7c36b1a
Show file tree
Hide file tree
Showing 5 changed files with 872 additions and 83 deletions.
160 changes: 160 additions & 0 deletions .gitignore
Original file line number Diff line number Diff line change
@@ -0,0 +1,160 @@
# Byte-compiled / optimized / DLL files
__pycache__/
*.py[cod]
*$py.class

# C extensions
*.so

# Distribution / packaging
.Python
build/
develop-eggs/
dist/
downloads/
eggs/
.eggs/
lib/
lib64/
parts/
sdist/
var/
wheels/
share/python-wheels/
*.egg-info/
.installed.cfg
*.egg
MANIFEST

# PyInstaller
# Usually these files are written by a python script from a template
# before PyInstaller builds the exe, so as to inject date/other infos into it.
*.manifest
*.spec

# Installer logs
pip-log.txt
pip-delete-this-directory.txt

# Unit test / coverage reports
htmlcov/
.tox/
.nox/
.coverage
.coverage.*
.cache
nosetests.xml
coverage.xml
*.cover
*.py,cover
.hypothesis/
.pytest_cache/
cover/

# Translations
*.mo
*.pot

# Django stuff:
*.log
local_settings.py
db.sqlite3
db.sqlite3-journal

# Flask stuff:
instance/
.webassets-cache

# Scrapy stuff:
.scrapy

# Sphinx documentation
docs/_build/

# PyBuilder
.pybuilder/
target/

# Jupyter Notebook
.ipynb_checkpoints

# IPython
profile_default/
ipython_config.py

# pyenv
# For a library or package, you might want to ignore these files since the code is
# intended to run in multiple environments; otherwise, check them in:
# .python-version

# pipenv
# According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
# However, in case of collaboration, if having platform-specific dependencies or dependencies
# having no cross-platform support, pipenv may install dependencies that don't work, or not
# install all needed dependencies.
#Pipfile.lock

# poetry
# Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control.
# This is especially recommended for binary packages to ensure reproducibility, and is more
# commonly ignored for libraries.
# https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control
#poetry.lock

# pdm
# Similar to Pipfile.lock, it is generally recommended to include pdm.lock in version control.
#pdm.lock
# pdm stores project-wide configurations in .pdm.toml, but it is recommended to not include it
# in version control.
# https://pdm.fming.dev/#use-with-ide
.pdm.toml

# PEP 582; used by e.g. github.com/David-OConnor/pyflow and github.com/pdm-project/pdm
__pypackages__/

# Celery stuff
celerybeat-schedule
celerybeat.pid

# SageMath parsed files
*.sage.py

# Environments
.env
.venv
env/
venv/
ENV/
env.bak/
venv.bak/

# Spyder project settings
.spyderproject
.spyproject

# Rope project settings
.ropeproject

# mkdocs documentation
/site

# mypy
.mypy_cache/
.dmypy.json
dmypy.json

# Pyre type checker
.pyre/

# pytype static type analyzer
.pytype/

# Cython debug symbols
cython_debug/

# PyCharm
# JetBrains specific template is maintained in a separate JetBrains.gitignore that can
# be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
# and can be added to the global gitignore or merged into this file. For a more nuclear
# option (not recommended) you can uncomment the following to ignore the entire idea folder.
#.idea/
99 changes: 16 additions & 83 deletions README.md
Original file line number Diff line number Diff line change
@@ -1,93 +1,26 @@
# bbWW

This package works on top of [coffea4bees](https://gitlab.cern.ch/cms-cmu/coffea4bees).


## Getting started

To make it easy for you to get started with GitLab, here's a list of recommended next steps.

Already a pro? Just edit this README.md and make it your own. Want to make it easy? [Use the template at the bottom](#editing-this-readme)!

## Add your files

- [ ] [Create](https://docs.gitlab.com/ee/user/project/repository/web_editor.html#create-a-file) or [upload](https://docs.gitlab.com/ee/user/project/repository/web_editor.html#upload-a-file) files
- [ ] [Add files using the command line](https://docs.gitlab.com/ee/gitlab-basics/add-file.html#add-a-file-using-the-command-line) or push an existing Git repository with the following command:
## Instructions:

```
cd existing_repo
git remote add origin https://gitlab.cern.ch/algomez/bbWW.git
git branch -M master
git push -uf origin master
git clone ssh://[email protected]:7999/cms-cmu/coffea4bees.git
cd coffea4bees/python/
git clone ssh://[email protected]:7999/algomez/bbWW.git
```

## Integrate with your tools

- [ ] [Set up project integrations](https://gitlab.cern.ch/algomez/bbWW/-/settings/integrations)

## Collaborate with your team

- [ ] [Invite team members and collaborators](https://docs.gitlab.com/ee/user/project/members/)
- [ ] [Create a new merge request](https://docs.gitlab.com/ee/user/project/merge_requests/creating_merge_requests.html)
- [ ] [Automatically close issues from merge requests](https://docs.gitlab.com/ee/user/project/issues/managing_issues.html#closing-issues-automatically)
- [ ] [Enable merge request approvals](https://docs.gitlab.com/ee/user/project/merge_requests/approvals/)
- [ ] [Set auto-merge](https://docs.gitlab.com/ee/user/project/merge_requests/merge_when_pipeline_succeeds.html)

## Test and Deploy

Use the built-in continuous integration in GitLab.

- [ ] [Get started with GitLab CI/CD](https://docs.gitlab.com/ee/ci/quick_start/index.html)
- [ ] [Analyze your code for known vulnerabilities with Static Application Security Testing (SAST)](https://docs.gitlab.com/ee/user/application_security/sast/)
- [ ] [Deploy to Kubernetes, Amazon EC2, or Amazon ECS using Auto Deploy](https://docs.gitlab.com/ee/topics/autodevops/requirements.html)
- [ ] [Use pull-based deployments for improved Kubernetes management](https://docs.gitlab.com/ee/user/clusters/agent/)
- [ ] [Set up protected environments](https://docs.gitlab.com/ee/ci/environments/protected_environments.html)

***

# Editing this README

When you're ready to make this README your own, just edit this file and use the handy template below (or feel free to structure it however you want - this is just a starting point!). Thanks to [makeareadme.com](https://www.makeareadme.com/) for this template.

## Suggestions for a good README

Every project is different, so consider which of these sections apply to yours. The sections used in the template are suggestions for most open source projects. Also keep in mind that while a README can be too long and detailed, too long is better than too short. If you think your README is too long, consider utilizing another form of documentation rather than cutting out information.
## Set Environment

## Name
Choose a self-explaining name for your project.

## Description
Let people know what your project can do specifically. Provide context and add a link to any reference visitors might be unfamiliar with. A list of Features or a Background subsection can also be added here. If there are alternatives to your project, this is a good place to list differentiating factors.

## Badges
On some READMEs, you may see small images that convey metadata, such as whether or not all the tests are passing for the project. You can use Shields to add some to your README. Many services also have instructions for adding a badge.

## Visuals
Depending on what you are making, it can be a good idea to include screenshots or even a video (you'll frequently see GIFs rather than actual videos). Tools like ttygif can help, but check out Asciinema for a more sophisticated method.

## Installation
Within a particular ecosystem, there may be a common way of installing things, such as using Yarn, NuGet, or Homebrew. However, consider the possibility that whoever is reading your README is a novice and would like more guidance. Listing specific steps helps remove ambiguity and gets people to using your project as quickly as possible. If it only runs in a specific context like a particular programming language version or operating system or has dependencies that have to be installed manually, also add a Requirements subsection.

## Usage
Use examples liberally, and show the expected output if you can. It's helpful to have inline the smallest example of usage that you can demonstrate, while providing links to more sophisticated examples if they are too long to reasonably include in the README.

## Support
Tell people where they can go to for help. It can be any combination of an issue tracker, a chat room, an email address, etc.

## Roadmap
If you have ideas for releases in the future, it is a good idea to list them in the README.

## Contributing
State if you are open to contributions and what your requirements are for accepting them.

For people who want to make changes to your project, it's helpful to have some documentation on how to get started. Perhaps there is a script that they should run or some environment variables that they need to set. Make these steps explicit. These instructions could also be useful to your future self.

You can also document commands to lint the code or run tests. These steps help to ensure high code quality and reduce the likelihood that the changes inadvertently break something. Having instructions for running tests is especially helpful if it requires external setup, such as starting a Selenium server for testing in a browser.

## Authors and acknowledgment
Show your appreciation to those who have contributed to the project.
This code has been tested at the cmslpc, and to simplify the setup, it can be used with the container needed to run on lpc condor computers. To set this container under `coffea4bees/`:
```
curl -OL https://raw.githubusercontent.com/CoffeaTeam/lpcjobqueue/main/bootstrap.sh
bash bootstrap.sh
```
This creates two new files in this directory: `shell` and `.bashrc`. _Additionally, this package contains a `set_shell.sh file`_ which runs the `./shell` executable with the coffea4bees container. This container is based on the `coffeateam/coffea-dask:latest` container including some additional python packages.
```
source set_shell.sh
```

## License
For open source projects, say how it is licensed.
Remember to run this previous command (aka set your environment) *every time you want to run something*.

## Project status
If you have run out of energy or time for your project, put a note at the top of the README saying that development has slowed down or stopped completely. Someone may choose to fork your project or volunteer to step in as a maintainer or owner, allowing your project to keep going. You can also make an explicit request for maintainers.
9 changes: 9 additions & 0 deletions metadata/JMENano_HHto2B2VLNu2J_UL16.txt
Original file line number Diff line number Diff line change
@@ -0,0 +1,9 @@
/store/user/algomez/JMEnano/GluGluToHHTo2B2VLNu2J_node_cHHH1_TuneCUETP8M1_PSWeights_13TeV-powheg-pythia8/GluGluToHHTo2B2VLNu2JnodecHHH1TuneCUETP8M1PSWeights13TeV-powheg-pythia8/231113_200123/0000/JMEnano-RunIIUL16NanoAODv9-00923_1.root
/store/user/algomez/JMEnano/GluGluToHHTo2B2VLNu2J_node_cHHH1_TuneCUETP8M1_PSWeights_13TeV-powheg-pythia8/GluGluToHHTo2B2VLNu2JnodecHHH1TuneCUETP8M1PSWeights13TeV-powheg-pythia8/231113_200123/0000/JMEnano-RunIIUL16NanoAODv9-00923_5.root
/store/user/algomez/JMEnano/GluGluToHHTo2B2VLNu2J_node_cHHH1_TuneCUETP8M1_PSWeights_13TeV-powheg-pythia8/GluGluToHHTo2B2VLNu2JnodecHHH1TuneCUETP8M1PSWeights13TeV-powheg-pythia8/231113_200123/0000/JMEnano-RunIIUL16NanoAODv9-00923_6.root
/store/user/algomez/JMEnano/GluGluToHHTo2B2VLNu2J_node_cHHH1_TuneCUETP8M1_PSWeights_13TeV-powheg-pythia8/GluGluToHHTo2B2VLNu2JnodecHHH1TuneCUETP8M1PSWeights13TeV-powheg-pythia8/231113_200123/0000/JMEnano-RunIIUL16NanoAODv9-00923_7.root
/store/user/algomez/JMEnano/GluGluToHHTo2B2VLNu2J_node_cHHH1_TuneCUETP8M1_PSWeights_13TeV-powheg-pythia8/GluGluToHHTo2B2VLNu2JnodecHHH1TuneCUETP8M1PSWeights13TeV-powheg-pythia8/231113_200123/0000/JMEnano-RunIIUL16NanoAODv9-00923_8.root
/store/user/algomez/JMEnano/GluGluToHHTo2B2VLNu2J_node_cHHH1_TuneCUETP8M1_PSWeights_13TeV-powheg-pythia8/GluGluToHHTo2B2VLNu2JnodecHHH1TuneCUETP8M1PSWeights13TeV-powheg-pythia8/231113_200123/0000/JMEnano-RunIIUL16NanoAODv9-00923_4.root
/store/user/algomez/JMEnano/GluGluToHHTo2B2VLNu2J_node_cHHH1_TuneCUETP8M1_PSWeights_13TeV-powheg-pythia8/GluGluToHHTo2B2VLNu2JnodecHHH1TuneCUETP8M1PSWeights13TeV-powheg-pythia8/231113_200123/0000/JMEnano-RunIIUL16NanoAODv9-00923_3.root
/store/user/algomez/JMEnano/GluGluToHHTo2B2VLNu2J_node_cHHH1_TuneCUETP8M1_PSWeights_13TeV-powheg-pythia8/GluGluToHHTo2B2VLNu2JnodecHHH1TuneCUETP8M1PSWeights13TeV-powheg-pythia8/231113_200123/0000/JMEnano-RunIIUL16NanoAODv9-00923_1-1.root
/store/user/algomez/JMEnano/GluGluToHHTo2B2VLNu2J_node_cHHH1_TuneCUETP8M1_PSWeights_13TeV-powheg-pythia8/GluGluToHHTo2B2VLNu2JnodecHHH1TuneCUETP8M1PSWeights13TeV-powheg-pythia8/231113_200123/0000/JMEnano-RunIIUL16NanoAODv9-00923_2.root
39 changes: 39 additions & 0 deletions metadata/bbWW.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,39 @@
runner:
chunksize: 1000
maxchunks: 20
test_files: 2
data_tier: nanoAOD
allowlist_sites:
- T3_US_FNALLPC
- T3_US_MIT
- T2_CH_CERN
- T2_CH_MIT
- T2_CH_Nebraska

config:
corrections_metadata: analysis/metadata/corrections.yml

datasets:
GluGluToHHTo2B2VLNu2J:
xs: 1.
'UL16_preVFP':
nanoAOD: bbWW/metadata/JMENano_HHto2B2VLNu2J_UL16.txt
TTToSemiLeptonic:
xs: 1.
'UL16_preVFP':
nanoAOD: /TTToSemiLeptonic_TuneCP5_13TeV-powheg-pythia8/RunIISummer20UL16NanoAODv9-20UL16JMENano_106X_mcRun2_asymptotic_v17-v1/NANOAODSIM

data:
'UL16_preVFP':
lumi: 1.
trigger:
- IsoMu22
- IsoTkMu22
- IsoMu22_eta2p1
- IsoTkMu22_eta2p1
- IsoMu24
- IsoTkMu24
- Ele27_WPTight_Gsf
- Ele25_eta2p1_WPTight_Gsf
- Ele27_eta2p1_WPLoose_Gsf
nanoAOD: /DoubleMuon/Run2018B-UL2018_MiniAODv2_JMENanoAODv9-v1/NANOAOD
Loading

0 comments on commit 7c36b1a

Please sign in to comment.