Genome class to handle fasta files and chromsizes throughout package #115

	name: Check Sphinx Docs

	on:
	push:
	branches: [main]
	pull_request:
	branches: [main]

	jobs:
	docs:
	name: Build Sphinx Documentation
	runs-on: ubuntu-latest
	defaults:
	run:
	shell: bash -eo pipefail {0} # Fail on error and enable pipefail

	steps:
	- uses: actions/checkout@v3

	- name: Set up Python
	uses: actions/setup-python@v4
	with:
	python-version: 3.11
	cache: "pip"
	cache-dependency-path: "**/pyproject.toml"

	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip wheel
	pip install ".[doc]"

	- name: Build Documentation and Check for Issues
	working-directory: docs
	run: \|
	make clean
	# Build the docs and capture output, treat warnings as errors (-W)
	sphinx-build -b html -W . _build/html 2>&1 \| tee sphinx-output.log

	- name: Upload Log if Build Failed
	if: failure()
	uses: actions/upload-artifact@v3
	with:
	name: sphinx-output-log
	path: docs/sphinx-output.log

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