Merge pull request #20 from aertslab/bugfix #108
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name: Test | |
on: | |
push: | |
branches: [main] | |
pull_request: | |
branches: [main] | |
schedule: | |
- cron: "0 5 1,15 * *" | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.ref }} | |
cancel-in-progress: true | |
jobs: | |
test: | |
runs-on: ${{ matrix.os }} | |
defaults: | |
run: | |
shell: bash -e {0} # -e to fail on error | |
strategy: | |
fail-fast: false | |
matrix: | |
include: | |
- os: ubuntu-latest | |
python: "3.9" | |
- os: ubuntu-latest | |
python: "3.11" | |
- os: ubuntu-latest | |
python: "3.11" | |
pip-flags: "--pre" | |
name: PRE-RELEASE DEPENDENCIES | |
name: ${{ matrix.name }} Python ${{ matrix.python }} | |
env: | |
OS: ${{ matrix.os }} | |
PYTHON: ${{ matrix.python }} | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set up Python ${{ matrix.python }} | |
uses: actions/setup-python@v4 | |
with: | |
python-version: ${{ matrix.python }} | |
cache: "pip" | |
cache-dependency-path: "**/pyproject.toml" | |
- name: Install test dependencies | |
run: | | |
python -m pip install --upgrade pip wheel | |
- name: Install dependencies | |
run: | | |
pip install ${{ matrix.pip-flags }} ".[dev,test]" | |
- name: Test | |
env: | |
MPLBACKEND: agg | |
PLATFORM: ${{ matrix.os }} | |
DISPLAY: :42 | |
run: | | |
coverage run -m pytest -v --color=yes | |
- name: Report coverage | |
run: | | |
coverage report | |
- name: Upload coverage | |
uses: codecov/codecov-action@v3 | |
env: | |
token: ${{ secrets.CODECOV_TOKEN }} | |
slug: aertslab/CREsted |