Improvements to knnshap parallelization #693
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| name: Tests, docs, package | |
| on: | |
| push: | |
| branches: [develop, master] | |
| pull_request: | |
| branches: [develop] | |
| workflow_dispatch: | |
| inputs: | |
| reason: | |
| description: Why did you trigger the pipeline? | |
| required: False | |
| default: Check if it runs again due to external changes | |
| env: | |
| GITHUB_BOT_USERNAME: github-actions[bot] | |
| GITHUB_BOT_EMAIL: 41898282+github-actions[bot]@users.noreply.github.com | |
| PY_COLORS: 1 | |
| MYPY_FORCE_COLOR: 1 | |
| PANDOC_VERSION: '3.1.6.2' | |
| jobs: | |
| code-quality: | |
| name: Lint code and check type hints | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Setup Python 3.8 | |
| uses: ./.github/actions/python | |
| with: | |
| python_version: 3.8 | |
| - uses: actions/cache@v4 | |
| with: | |
| path: ~/.cache/pre-commit | |
| key: pre-commit-${{ env.pythonLocation }}-${{ hashFiles('.pre-commit-config.yaml') }} | |
| - name: Lint Code | |
| run: | | |
| pre-commit run --all --show-diff-on-failure | |
| python build_scripts/run_pylint.py | (pylint-json2html -f jsonextended -o pylint.html) | |
| shell: bash | |
| - name: Generate mypy cache key | |
| id: generate-mypy-cache-key | |
| run: | | |
| MYPY_VERSION=$(mypy --version | sed 's/[^0-9.]*\([0-9.]*\).*/\1/') | |
| echo "key=mypy-$MYPY_VERSION-${{ env.pythonLocation }}" >> $GITHUB_OUTPUT | |
| - uses: actions/cache@v4 | |
| with: | |
| path: .mypy_cache | |
| key: ${{ steps.generate-mypy-cache-key.outputs.key }} | |
| - name: Check Type Hints | |
| run: mypy src/ | |
| docs: | |
| name: Build Docs | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| lfs: true | |
| - name: Setup Python 3.8 | |
| uses: ./.github/actions/python | |
| with: | |
| python_version: 3.8 | |
| - name: Install Pandoc | |
| uses: r-lib/actions/setup-pandoc@v2 | |
| with: | |
| pandoc-version: ${{ env.PANDOC_VERSION }} | |
| - name: Build Docs | |
| run: mkdocs build | |
| group-tests: | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python_version: ["3.8", "3.9", "3.10", "3.11"] | |
| group_number: [1, 2, 3, 4] | |
| name: Run Tests - Python ${{ matrix.python_version }} - Group ${{ matrix.group_number }} | |
| uses: ./.github/workflows/run-tests-workflow.yaml | |
| secrets: inherit | |
| with: | |
| split_size: 4 | |
| group_number: ${{ matrix.group_number }} | |
| python_version: ${{ matrix.python_version }} | |
| needs: [code-quality] | |
| notebook-tests: | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python_version: ["3.8", "3.9", "3.10", "3.11"] | |
| group_number: [1, 2, 3, 4] | |
| name: Run Notebook tests - Python ${{ matrix.python_version }} - Group ${{ matrix.group_number }} | |
| uses: ./.github/workflows/run-notebook-tests-workflow.yaml | |
| with: | |
| python_version: ${{ matrix.python_version }} | |
| split_size: 4 | |
| group_number: ${{ matrix.group_number }} | |
| needs: [code-quality] | |
| legacy-tests: | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python_version: [ "3.11" ] | |
| group_number: [ 1, 2, 3, 4 ] | |
| name: Run Legacy tests - Python ${{ matrix.python_version }} - Group ${{ matrix.group_number }} | |
| uses: ./.github/workflows/run-legacy-tests-workflow.yaml | |
| with: | |
| python_version: ${{ matrix.python_version }} | |
| split_size: 4 | |
| group_number: ${{ matrix.group_number }} | |
| needs: [ code-quality ] | |
| push-docs-and-release-testpypi: | |
| name: Push Docs and maybe release Package to TestPyPI | |
| runs-on: ubuntu-latest | |
| needs: [docs, group-tests, notebook-tests] | |
| if: ${{ github.ref == 'refs/heads/develop' }} | |
| concurrency: | |
| group: publish | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| lfs: true | |
| - name: Setup Python 3.8 | |
| uses: ./.github/actions/python | |
| with: | |
| python_version: 3.8 | |
| - name: Install Pandoc | |
| uses: r-lib/actions/setup-pandoc@v2 | |
| with: | |
| pandoc-version: ${{ env.PANDOC_VERSION }} | |
| - name: Deploy Docs | |
| uses: ./.github/actions/deploy-docs | |
| with: | |
| version: devel | |
| alias: develop | |
| title: Development | |
| email: ${{ env.GITHUB_BOT_EMAIL }} | |
| username: ${{ env.GITHUB_BOT_USERNAME }} | |
| - name: Build and publish to TestPyPI | |
| env: | |
| TWINE_USERNAME: __token__ | |
| TWINE_PASSWORD: ${{ secrets.TEST_PYPI_PASSWORD }} | |
| run: | | |
| set -x | |
| export BUILD_NUMBER=$GITHUB_RUN_NUMBER | |
| bump2version --no-tag --no-commit --verbose --serialize '{major}.{minor}.{patch}.{release}{$BUILD_NUMBER}' boguspart | |
| python setup.py sdist bdist_wheel | |
| twine upload -r testpypi --verbose --non-interactive dist/* |