Merge pull request #141 from UPHL-BioNGS/update-20231024

Update 20231024
UPHL-BioNGS · Oct 24, 2023 · 9a775bc · 9a775bc
2 parents 89e8b0c + 98c93b1
commit 9a775bc
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/modules/amrfinderplus.nf b/modules/amrfinderplus.nf
@@ -2,7 +2,7 @@ process amrfinderplus {
   tag           "${sample}"
   label         "medcpus"
   publishDir    params.outdir, mode: 'copy'
-  container     'staphb/ncbi-amrfinderplus:3.11.18-2023-08-08.2'
+  container     'staphb/ncbi-amrfinderplus:3.11.20-2023-09-26.1'
   maxForks      10
   //#UPHLICA errorStrategy { task.attempt < 2 ? 'retry' : 'ignore'}
   //#UPHLICA cpus 7

diff --git a/nextflow.config b/nextflow.config
@@ -3,7 +3,7 @@ manifest {
   author                          = 'Erin Young'
   homePage                        = 'https://github.com/UPHL-BioNGS/Grandeur'
   mainScript                      = 'grandeur.nf'
-  version                         = '3.5.20231017'
+  version                         = '3.5.20231024'
   defaultBranch                   = 'main'
   description                     = 'Grandeur is short-read de novo assembly pipeline with serotyping.'
 }